RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 PRSS38A1L453 326 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 TGOLN2O43493 480 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 DHPSP49366 369 aaPredicted RBP14.32□□□□□ -0.12
DHFR-201ENST00000439211 ENPP2Q13822 863 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 RUNX2Q13950 521 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 PPP1R3BQ86XI6 285 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 OR5AP2Q8NGF4 316 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 NUDCD2Q8WVJ2 157 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 ADAD1Q96M93 576 aaKnown RBP14.32□□□□□ -0.12
DHFR-201ENST00000439211 SMIM3Q9BZL3 60 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 TP53TG5Q9Y2B4 290 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 THSD7BQ9C0I4 1608 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 PLPP2O43688 288 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 DNAJB6O75190 326 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 RDH16O75452 317 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 CSTAP01040 98 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 HOXB5P09067 269 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 NID1P14543 1247 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 HOXA5P20719 270 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 GRK6P43250 576 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 BPIFB3P59826 476 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 PPA1Q15181 289 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 TMEM244Q5VVB8 128 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 DHRS11Q6UWP2 260 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 ZNF705AQ6ZN79 300 aaPredicted RBP14.31□□□□□ -0.12
DHFR-201ENST00000439211 ZNF676Q8N7Q3 588 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 OR52R1Q8NGF1 315 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 PATE1Q8WXA2 126 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 NMNAT3Q96T66 252 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 TEX101Q9BY14 249 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 CMC2Q9NRP2 79 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 TRAV14DV4A0A0A6YYC5 116 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 FGF17O60258 216 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 PRKNO60260 465 aaPredicted RBP14.31□□□□□ -0.12
DHFR-201ENST00000439211 ST6GAL1P15907 406 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 TNFRSF9Q07011 255 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 PRSS41Q7RTY9 318 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 DAPP1Q9UN19 280 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 FBXO7Q9Y3I1 522 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 A0A0G2JK05 382 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 OR5H15A6NDH6 313 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 OR5H1A6NKK0 313 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 H0YGG7 62 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 ARF3P61204 181 aaPredicted RBP14.31□□□□□ -0.12
DHFR-201ENST00000439211 SNRPNP63162 240 aaKnown RBP14.31□□□□□ -0.12
DHFR-201ENST00000439211 ACSM1Q08AH1 577 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 C1orf61Q13536 156 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 GGNBP1Q5YKI7 109 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 DBX2Q6ZNG2 339 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 CSNK1A1LQ8N752 337 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 OR6N1Q8NGY5 312 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 ZNF563Q8TA94 476 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 ZFYVE21Q9BQ24 234 aa14.31□□□□□ -0.12
DHFR-201ENST00000439211 C5orf42Q9H799 3197 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 HOXC4P09017 264 aaPredicted RBP14.3□□□□□ -0.12
DHFR-201ENST00000439211 ZNF658BQ4V348 819 aaPredicted RBP14.3□□□□□ -0.12
DHFR-201ENST00000439211 SLC35F2Q8IXU6 374 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 PHYHIPQ92561 330 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 MYADMQ96S97 322 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 CCDC86Q9H6F5 360 aaKnown RBP14.3□□□□□ -0.12
DHFR-201ENST00000439211 LPAR3Q9UBY5 353 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 LAMP5Q9UJQ1 280 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 CPED1A4D0V7 1026 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 ELOA3DA6NLF2 546 aaPredicted RBP14.3□□□□□ -0.12
DHFR-201ENST00000439211 CA3P07451 260 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 ACTBP60709 375 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 ACTG1P63261 375 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 ARHGAP11BQ3KRB8 267 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 ELOA3BQ3SY89 546 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 MRM1Q6IN84 353 aaKnown RBP14.3□□□□□ -0.12
DHFR-201ENST00000439211 CHST4Q8NCG5 386 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 ELOA3Q8NG57 546 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 LMF1Q96S06 567 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 NRSN2Q9GZP1 204 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 SEMA6CQ9H3T2 930 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 RIMS4Q9H426 269 aaPredicted RBP14.3□□□□□ -0.12
DHFR-201ENST00000439211 RNF122Q9H9V4 155 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 FBXL21Q9UKT6 434 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 MMACHCQ9Y4U1 282 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 DOCK9Q9BZ29 2069 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 GPR89AB7ZAQ6 455 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 NDUFB2O95178 105 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 GPR89BP0CG08 455 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 PSMB6P28072 239 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 IGFALSP35858 605 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 MAP3K8P41279 467 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 CAMLGP49069 296 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 SIRPAP78324 504 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 VN1R4Q7Z5H5 301 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 GALNT16Q8N428 558 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 TCTN2Q96GX1 697 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 CCDC74BQ96LY2 380 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 PACRGQ96M98 296 aaPredicted RBP14.3□□□□□ -0.12
DHFR-201ENST00000439211 SFXN1Q9H9B4 322 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 FOXJ3Q9UPW0 622 aa14.3□□□□□ -0.12
DHFR-201ENST00000439211 EXOGQ9Y2C4 368 aaKnown RBP14.3□□□□□ -0.12
DHFR-201ENST00000439211 TRAV1-2A0A0B4J238 106 aa14.29□□□□□ -0.12
DHFR-201ENST00000439211 EIF1AYO14602 144 aaKnown RBP14.29□□□□□ -0.12
DHFR-201ENST00000439211 SCAF4O95104 1147 aaKnown RBP14.29□□□□□ -0.12
DHFR-201ENST00000439211 OR6A2O95222 327 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms