RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 NLKQ9UBE8 527 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 POLR1DQ9Y2S0 133 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 CACNG2Q9Y698 323 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 LOC107986453A0A1B0GWG9 222 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 NPIPA2E9PIF3 369 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 NPIPA3F8WFD2 350 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 H3BSH0 61 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 CCNKO75909 580 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 ADRB1P08588 477 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 IGFBP3P17936 291 aaPredicted RBP22.8■■□□□ 1.24
CPNE1-216ENST00000437340 CNR1P21554 472 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 CSNK1A1P48729 337 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 RAC3P60763 192 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 RSBN1Q5VWQ0 802 aaPredicted RBP22.8■■□□□ 1.24
CPNE1-216ENST00000437340 TOMM5Q8N4H5 51 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 OR10S1Q8NGN2 331 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 OR14L1PQ8NHC6 308 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 ADAMTS17Q8TE56 1095 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 TMEM54Q969K7 222 aa22.8■■□□□ 1.24
CPNE1-216ENST00000437340 SF3B5Q9BWJ5 86 aaKnown RBP22.8■■□□□ 1.24
CPNE1-216ENST00000437340 HMX3A6NHT5 357 aa22.79■■□□□ 1.24
CPNE1-216ENST00000437340 CENPXA8MT69 81 aa22.79■■□□□ 1.24
CPNE1-216ENST00000437340 ZNF878C9JN71 531 aa22.79■■□□□ 1.24
CPNE1-216ENST00000437340 CD37P11049 281 aa22.79■■□□□ 1.24
CPNE1-216ENST00000437340 MRPS10P82664 201 aaKnown RBP22.79■■□□□ 1.24
CPNE1-216ENST00000437340 DGCR2P98153 550 aa22.79■■□□□ 1.24
CPNE1-216ENST00000437340 OC90Q02509 493 aaPredicted RBP22.79■■□□□ 1.24
CPNE1-216ENST00000437340 C10orf128Q5T292 105 aa22.79■■□□□ 1.24
CPNE1-216ENST00000437340 ASPHD2Q6ICH7 369 aa22.79■■□□□ 1.24
CPNE1-216ENST00000437340 OR9K2Q8NGE7 335 aa22.79■■□□□ 1.24
CPNE1-216ENST00000437340 CREB3L1Q96BA8 519 aa22.79■■□□□ 1.24
CPNE1-216ENST00000437340 INTS12Q96CB8 462 aaKnown RBP22.79■■□□□ 1.24
CPNE1-216ENST00000437340 MOB1AQ9H8S9 216 aa22.79■■□□□ 1.24
CPNE1-216ENST00000437340 EMC7Q9NPA0 242 aa22.79■■□□□ 1.24
CPNE1-216ENST00000437340 LOC101059948A0A1B0GTJ6 334 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 MEGF11A6BM72 1044 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 EIF1AYO14602 144 aaKnown RBP22.78■■□□□ 1.24
CPNE1-216ENST00000437340 TNFSF11O14788 317 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 GABREP78334 506 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 ELMOD2Q8IZ81 293 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 OR2M2Q96R28 347 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 PLEKHA1Q9HB21 404 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 ZFP64Q9NPA5 681 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 STMND1H3BQB6 276 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 SLC17A2O00624 439 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 CD3GP09693 182 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 HLA-DMAP28067 261 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 CDAP32320 146 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 LSM6P62312 80 aaKnown RBP22.78■■□□□ 1.24
CPNE1-216ENST00000437340 GLT8D1Q68CQ7 371 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 CFAP77Q6ZQR2 320 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 KRT74Q7RTS7 529 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 YRDCQ86U90 279 aaKnown RBP22.78■■□□□ 1.24
CPNE1-216ENST00000437340 OR13C3Q8NGS6 347 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 UCN2Q96RP3 112 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 OR2B2Q9GZK3 357 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 DEPPQ9NTK1 212 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 LRFN1Q9P244 771 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 ABI3Q9P2A4 366 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 CDV3Q9UKY7 258 aaKnown RBP22.78■■□□□ 1.24
CPNE1-216ENST00000437340 CEP250Q9BV73 2442 aa22.78■■□□□ 1.24
CPNE1-216ENST00000437340 H0YC42 278 aa22.77■■□□□ 1.24
CPNE1-216ENST00000437340 ORC5O43913 435 aa22.77■■□□□ 1.24
CPNE1-216ENST00000437340 EIF1AXP47813 144 aaKnown RBP22.77■■□□□ 1.24
CPNE1-216ENST00000437340 SUCLG1P53597 346 aaKnown RBP22.77■■□□□ 1.24
CPNE1-216ENST00000437340 DYRK1AQ13627 763 aa22.77■■□□□ 1.24
CPNE1-216ENST00000437340 PLA1AQ53H76 456 aa22.77■■□□□ 1.24
CPNE1-216ENST00000437340 FAM166AQ6J272 317 aa22.77■■□□□ 1.24
CPNE1-216ENST00000437340 OR6N1Q8NGY5 312 aa22.77■■□□□ 1.24
CPNE1-216ENST00000437340 PNPLA2Q96AD5 504 aa22.77■■□□□ 1.24
CPNE1-216ENST00000437340 UPRTQ96BW1 309 aa22.77■■□□□ 1.24
CPNE1-216ENST00000437340 BOKQ9UMX3 212 aaPredicted RBP22.77■■□□□ 1.24
CPNE1-216ENST00000437340 MED12Q93074 2177 aa22.77■■□□□ 1.24
CPNE1-216ENST00000437340 GABARAPH6UMI1 98 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 RFPL3SP0C7P2 107 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 CASRP41180 1078 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 GUCA1AP43080 201 aaPredicted RBP22.76■■□□□ 1.23
CPNE1-216ENST00000437340 PSMA6P60900 246 aaKnown RBP22.76■■□□□ 1.23
CPNE1-216ENST00000437340 RAB11BQ15907 218 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 DCAF10Q5QP82 559 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 TMEM69Q5SWH9 247 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 ABHD17BQ5VST6 288 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 FOXL2NBQ6ZUU3 175 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 LINGO2Q7L985 606 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 IZUMO1Q8IYV9 350 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 TMEM123Q8N131 208 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 OR6F1Q8NGZ6 308 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 ZNF385AQ96PM9 386 aaKnown RBP22.76■■□□□ 1.23
CPNE1-216ENST00000437340 SRXN1Q9BYN0 137 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 SLC17A5Q9NRA2 495 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 NUFIP1Q9UHK0 495 aaKnown RBP22.76■■□□□ 1.23
CPNE1-216ENST00000437340 MRPS18BQ9Y676 258 aaKnown RBP22.76■■□□□ 1.23
CPNE1-216ENST00000437340 AHCTF1Q8WYP5 2266 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 IGHV3-15A0A0B4J1V0 119 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 A0A0B4J293 547 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 CD96P40200 585 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 PTH2RP49190 550 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 TATDN3Q17R31 274 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 GGNQ86UU5 652 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 GLCCI1Q86VQ1 547 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms