RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 A8MXE2 369 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 RAD51DO75771 328 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 MMP7P09237 267 aaPredicted RBP20.13■□□□□ 0.81
CPSF4-204ENST00000436336 TLE1Q04724 770 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 TBRG1Q3YBR2 411 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 CCDC92Q53HC0 331 aaPredicted RBP20.13■□□□□ 0.81
CPSF4-204ENST00000436336 OR7E24Q6IFN5 339 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 ZNF474Q6S9Z5 364 aaPredicted RBP20.13■□□□□ 0.81
CPSF4-204ENST00000436336 CXorf67Q86X51 503 aaPredicted RBP20.13■□□□□ 0.81
CPSF4-204ENST00000436336 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.13■□□□□ 0.81
CPSF4-204ENST00000436336 FGFBP3Q8TAT2 258 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 DDX28Q9NUL7 540 aaKnown RBP20.13■□□□□ 0.81
CPSF4-204ENST00000436336 GALNT8Q9NY28 637 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 PLEK2Q9NYT0 353 aa20.13■□□□□ 0.81
CPSF4-204ENST00000436336 DPPA5A6NC42 116 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 HOXB1P14653 301 aaPredicted RBP20.12■□□□□ 0.81
CPSF4-204ENST00000436336 CPEP16870 476 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 LIPAP38571 399 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 GTF2A1P52655 376 aaPredicted RBP20.12■□□□□ 0.81
CPSF4-204ENST00000436336 TPBGQ13641 420 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 RAB35Q15286 201 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 TSTQ16762 297 aaKnown RBP20.12■□□□□ 0.81
CPSF4-204ENST00000436336 CCDC58Q4VC31 144 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 HIKESHIQ53FT3 197 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 ELFN2Q5R3F8 820 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 SFRP5Q5T4F7 317 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 LUZP2Q86TE4 346 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 CCDC36Q8IYA8 594 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 NANOS1Q8WY41 292 aaKnown RBP20.12■□□□□ 0.81
CPSF4-204ENST00000436336 UFD1Q92890 307 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 OR2H1Q9GZK4 316 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 SLC5A6Q9Y289 635 aa20.12■□□□□ 0.81
CPSF4-204ENST00000436336 E9PI62 339 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 CCRL2O00421 344 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 SGCEO43556 437 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 UBL3O95164 117 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 PATE4P0C8F1 98 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 DCTDP32321 178 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 TGM4P49221 684 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 PSG4Q00888 419 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 LIX1LQ8IVB5 337 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 ATF6BQ99941 703 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 HDHD2Q9H0R4 259 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 NIPAL2Q9H841 368 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 RNF121Q9H920 327 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 JKAMPQ9P055 326 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 GRIP1Q9Y3R0 1128 aa20.11■□□□□ 0.81
CPSF4-204ENST00000436336 B8ZZF3 427 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 EEF1E1-BLOC1S5C9J1V9 151 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 EEF1E1O43324 174 aaKnown RBP20.1■□□□□ 0.81
CPSF4-204ENST00000436336 RPP14O95059 124 aaKnown RBP20.1■□□□□ 0.81
CPSF4-204ENST00000436336 ARR3P36575 388 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 PSMB10P40306 273 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 RGS6P49758 472 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 GRB2P62993 217 aaKnown RBP20.1■□□□□ 0.81
CPSF4-204ENST00000436336 TAF13Q15543 124 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 RPL22L1Q6P5R6 122 aaKnown RBP20.1■□□□□ 0.81
CPSF4-204ENST00000436336 C17orf78Q8N4C9 275 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 RELL2Q8NC24 303 aaPredicted RBP20.1■□□□□ 0.81
CPSF4-204ENST00000436336 EPG5Q9HCE0 2579 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 ESPL1Q14674 2120 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 A0A1B0GUH1 482 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 DOK2O60496 412 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 HLA-HP01893 362 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 HSD11B1P28845 292 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 GPR50Q13585 617 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 TMEM53Q6P2H8 277 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 FJX1Q86VR8 437 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 PHC2Q8IXK0 858 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 ZFP41Q8N8Y5 198 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 YIPF6Q96EC8 236 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 ST6GALNAC2Q9UJ37 374 aa20.1■□□□□ 0.81
CPSF4-204ENST00000436336 OGG1O15527 345 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 SYNGR3O43761 229 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 CD79AP11912 226 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 CD36P16671 472 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 CELP19835 753 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 TGFBR2P37173 567 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 UBE2NP61088 152 aaKnown RBP20.09■□□□□ 0.81
CPSF4-204ENST00000436336 ECH1Q13011 328 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 CDK5R1Q15078 307 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 SSX1Q16384 188 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 LIPKQ5VXJ0 399 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 ZNF774Q6NX45 483 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 BHLHA15Q7RTS1 189 aaPredicted RBP20.09■□□□□ 0.81
CPSF4-204ENST00000436336 ALDH16A1Q8IZ83 802 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 RNF166Q96A37 237 aaPredicted RBP20.09■□□□□ 0.81
CPSF4-204ENST00000436336 KCNJ15Q99712 375 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 WNT5BQ9H1J7 359 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 NDUFA13Q9P0J0 144 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 FBXL3Q9UKT7 428 aa20.09■□□□□ 0.81
CPSF4-204ENST00000436336 SIRT4Q9Y6E7 314 aaPredicted RBP20.09■□□□□ 0.81
CPSF4-204ENST00000436336 ARPC4-TTLL3A0A0A6YYG9 625 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 SMIM31A0A1B0GVY4 71 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 ZNF503-AS2A6NEH8 195 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 A6NHS1 94 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 PLPP2O43688 288 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 PSMB1P20618 241 aaKnown RBP20.08■□□□□ 0.81
CPSF4-204ENST00000436336 HOXC12P31275 282 aa20.08■□□□□ 0.81
CPSF4-204ENST00000436336 RAB1AP62820 205 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms