RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 H7C1C5 153 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 IFNL4K9M1U5 179 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 FXYD1O00168 92 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 ICMTO60725 284 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 NGFP01138 241 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 CD55P08174 381 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 PPIAL4FP0DN26 164 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 KDELR2P33947 212 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 MDH2P40926 338 aaKnown RBP6.56□□□□□ -1.36
VPS50-203ENST00000436177 YAP1P46937 504 aaKnown RBP6.56□□□□□ -1.36
VPS50-203ENST00000436177 SLC9A3P48764 834 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 CENPAP49450 140 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 BTG1P62324 171 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 LCN6P62502 163 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 UBA52P62987 128 aaKnown RBP6.56□□□□□ -1.36
VPS50-203ENST00000436177 GUCY1A3Q02108 690 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 FOXL1Q12952 345 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 IFI44LQ53G44 452 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 AWAT1Q58HT5 328 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 SLC25A47Q6Q0C1 308 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 BTNL3Q6UXE8 466 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 NLRC3Q7RTR2 1065 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 CALHM3Q86XJ0 350 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 OFCC1Q8IZS5 231 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 MUC20Q8N307 709 aaPredicted RBP6.56□□□□□ -1.36
VPS50-203ENST00000436177 CLDN22Q8N7P3 220 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 SIGLECL1Q8N7X8 197 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 ATG16L2Q8NAA4 619 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 OR13C2Q8NGS9 318 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 ACOT11Q8WXI4 607 aaPredicted RBP6.56□□□□□ -1.36
VPS50-203ENST00000436177 POP5Q969H6 163 aaKnown RBP6.56□□□□□ -1.36
VPS50-203ENST00000436177 NMD3Q96D46 503 aaKnown RBP6.56□□□□□ -1.36
VPS50-203ENST00000436177 VIPAS39Q9H9C1 493 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 POLE4Q9NR33 117 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 RHCGQ9UBD6 479 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 NUP50Q9UKX7 468 aa6.56□□□□□ -1.36
VPS50-203ENST00000436177 FAM32AQ9Y421 112 aaKnown RBP6.56□□□□□ -1.36
VPS50-203ENST00000436177 LOC100653049A0A140TA62 436 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 PRSS37A4D1T9 235 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 J3QW42 95 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 AHCYL1O43865 530 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 GMNNO75496 209 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 KRT34O76011 436 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 IGHV2-70P01814 119 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 CD14P08571 375 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 TSPAN19P0C672 248 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 COX5BP10606 129 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 RPS2P15880 293 aaKnown RBP6.55□□□□□ -1.36
VPS50-203ENST00000436177 GPR4P46093 362 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 MTNR1AP48039 350 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 SRP9P49458 86 aaKnown RBP6.55□□□□□ -1.36
VPS50-203ENST00000436177 RGS6P49758 472 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 GZMMP51124 257 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 SELENOWP63302 87 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 SF3A3Q12874 501 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS50-203ENST00000436177 PSG7Q13046 419 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 KLF10Q13118 480 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 BAMBIQ13145 260 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 CDK5R2Q13319 367 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 AQP6Q13520 282 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 KRR1Q13601 381 aaKnown RBP6.55□□□□□ -1.36
VPS50-203ENST00000436177 ENDOGQ14249 297 aaKnown RBP6.55□□□□□ -1.36
VPS50-203ENST00000436177 TMEM155Q4W5P6 130 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 FGD3Q5JSP0 725 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 GPR139Q6DWJ6 353 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 SLC27A4Q6P1M0 643 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 DNM1P34Q6PK57 102 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 FOXL2NBQ6ZUU3 175 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 ADCK1Q86TW2 530 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 GLB1L2Q8IW92 636 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 RNF113BQ8IZP6 322 aaKnown RBP6.55□□□□□ -1.36
VPS50-203ENST00000436177 OR5L1Q8NGL2 311 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 ITLN1Q8WWA0 313 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 FAM162AQ96A26 154 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 SLC25A28Q96A46 364 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 RCN3Q96D15 328 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 CMBLQ96DG6 245 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 PLEKHA8Q96JA3 519 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 SAMD8Q96LT4 415 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 ZNF583Q96ND8 569 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 MS4A7Q9GZW8 240 aaPredicted RBP6.55□□□□□ -1.36
VPS50-203ENST00000436177 FGFR1OP2Q9NVK5 253 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 TBCCD1Q9NVR7 557 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 KIF17Q9P2E2 1029 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 ASH2LQ9UBL3 628 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 LRCH1Q9Y2L9 728 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 ADAM18Q9Y3Q7 739 aa6.55□□□□□ -1.36
VPS50-203ENST00000436177 TEX13CA0A0J9YWL9 993 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 OR6C6A6NF89 314 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 DNAJC9-AS1A6NH13 148 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 CXCR6O00574 342 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 NDUFAB1O14561 156 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 SLC22A2O15244 555 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 SLC16A7O60669 478 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 KHDRBS3O75525 346 aaKnown RBP6.54□□□□□ -1.36
VPS50-203ENST00000436177 NDUFB2O95178 105 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 IRF2P14316 349 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 RAC2P15153 192 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 KITLGP21583 273 aa6.54□□□□□ -1.36
VPS50-203ENST00000436177 PRTN3P24158 256 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms