RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 ELFN2Q5R3F8 820 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 ZNF362Q5T0B9 420 aaPredicted RBP9.84□□□□□ -0.83
COL28A1-203ENST00000435823 LRP11Q86VZ4 500 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 C10orf67Q8IYJ2 551 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 IQCF1Q8N6M8 205 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 OR9Q1Q8NGQ5 310 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 OR1F12Q8NHA8 337 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 ABHD4Q8TB40 342 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 SNX33Q8WV41 574 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 NEU4Q8WWR8 484 aaPredicted RBP9.84□□□□□ -0.83
COL28A1-203ENST00000435823 OTULINQ96BN8 352 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 PLEKHA8Q96JA3 519 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 DDOQ99489 341 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 RBM4Q9BWF3 364 aaKnown RBP9.84□□□□□ -0.83
COL28A1-203ENST00000435823 HDHD2Q9H0R4 259 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 MS4A5Q9H3V2 200 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 MYOZ1Q9NP98 299 aaPredicted RBP9.84□□□□□ -0.83
COL28A1-203ENST00000435823 DLL4Q9NR61 685 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 PAPOLBQ9NRJ5 636 aaKnown RBP9.84□□□□□ -0.83
COL28A1-203ENST00000435823 SLCO1C1Q9NYB5 712 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 ATPIF1Q9UII2 106 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 LHFPL6Q9Y693 200 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 OR6C6A6NF89 314 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 G3V2T6 193 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 SMAD7O15105 426 aaKnown RBP9.83□□□□□ -0.84
COL28A1-203ENST00000435823 ICMTO60725 284 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 MT-ND5P03915 603 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 ADRA2AP08913 450 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 ZNF250P15622 560 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 WNT5AP41221 380 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 RGS6P49758 472 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 PDLIM4P50479 330 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 ACTR3P61158 418 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 MSMPQ1L6U9 139 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 CCDC92Q53HC0 331 aaPredicted RBP9.83□□□□□ -0.84
COL28A1-203ENST00000435823 SPATA46Q5T0L3 261 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 FAHD1Q6P587 224 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 CORO6Q6QEF8 472 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 RFPL4BQ6ZWI9 263 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 AMIGO2Q86SJ2 522 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 BIVMQ86UB2 503 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 ZDHHC13Q8IUH4 622 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 ZNF101Q8IZC7 436 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 ZNF525Q8N782 197 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 OR51L1Q8NGJ5 315 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 IPCEF1Q8WWN9 437 aaPredicted RBP9.83□□□□□ -0.84
COL28A1-203ENST00000435823 LRTOMTQ8WZ04 291 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 FAM168AQ92567 244 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 COX4I2Q96KJ9 171 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 RAB3IPQ96QF0 476 aaPredicted RBP9.83□□□□□ -0.84
COL28A1-203ENST00000435823 DCLRE1CQ96SD1 692 aaKnown RBP9.83□□□□□ -0.84
COL28A1-203ENST00000435823 PITX2Q99697 317 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 COQ7Q99807 217 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 TBCCD1Q9NVR7 557 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 MRPL22Q9NWU5 206 aaKnown RBP9.83□□□□□ -0.84
COL28A1-203ENST00000435823 TAAR3PQ9P1P4 343 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 GRIP1Q9Y3R0 1128 aa9.83□□□□□ -0.84
COL28A1-203ENST00000435823 IGLV3-9A0A075B6K5 115 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 TVP23AA6NH52 213 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 RNF223E7ERA6 249 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 PRR23D1E9PI22 279 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-203ENST00000435823 H3BSA7 217 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 CLPTM1O96005 669 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 PRR23D2P0DMB1 279 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-203ENST00000435823 SPI1P17947 270 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 TUBG1P23258 451 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 ALDH3B1P43353 468 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 CRISP1P54107 249 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 PPP1CBP62140 327 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 HIST1H3AP68431 136 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 CDK5Q00535 292 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 DBPQ10586 325 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-203ENST00000435823 ECH1Q13011 328 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 KPNB1Q14974 876 aaKnown RBP9.82□□□□□ -0.84
COL28A1-203ENST00000435823 MAD2L1BPQ15013 274 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-203ENST00000435823 HIST2H3PS2Q5TEC6 136 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 SLC18B1Q6NT16 456 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 ACSM5Q6NUN0 579 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 TMEM154Q6P9G4 183 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 DNM1P46Q6ZS02 220 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 HIST2H3AQ71DI3 136 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 LINC00346Q8IVM7 164 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 PARP8Q8N3A8 854 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 OR6K6Q8NGW6 343 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 SLC25A40Q8TBP6 338 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 PYDC1Q8WXC3 89 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 CENPNQ96H22 339 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-203ENST00000435823 COG8Q96MW5 612 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 REG4Q9BYZ8 158 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 PRRG3Q9BZD7 231 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 NMNAT2Q9BZQ4 307 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 OR2J1Q9GZK6 312 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 TPK1Q9H3S4 243 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 SLC25A19Q9HC21 320 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 TUBG2Q9NRH3 451 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 KRT84Q9NSB2 600 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-203ENST00000435823 MYEF2Q9P2K5 600 aaKnown RBP9.82□□□□□ -0.84
COL28A1-203ENST00000435823 CYB5R1Q9UHQ9 305 aa9.82□□□□□ -0.84
COL28A1-203ENST00000435823 ENOPH1Q9UHY7 261 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms