RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 M0R135 149 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 GUSBP08236 651 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 NME2P22392 152 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 HTR1FP30939 366 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 BCL6P41182 706 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 GIPRP48546 466 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF799Q96GE5 643 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 OPALINQ96PE5 141 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 MMP28Q9H239 520 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 MROH1Q8NDA8 1641 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 OR5H8P0DN80 308 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 CD68P34810 354 aaPredicted RBP10.23□□□□□ -0.77
SCN4A-201ENST00000435607 SPANXN5Q5MJ07 72 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 OR4F17Q8NGA8 305 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 OR11G2Q8NGC1 345 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 OR4F5Q8NH21 305 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 SPPL3Q8TCT6 385 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 OR4F4Q96R69 305 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 SLCO1C1Q9NYB5 712 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 FKBP11Q9NYL4 201 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 ARL2-SNX15V9GYD0 113 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 DNAJC13O75165 2243 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 WDR1O75083 606 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 CBR3O75828 277 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 DGAT2L6Q6ZPD8 337 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 ROBO4Q8WZ75 1007 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 MS4A8Q9BY19 250 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 OR6C68A6NDL8 312 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 NCR1O76036 304 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 TRAPPC2P0DI81 140 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 TRAPPC2BP0DI82 140 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 MICBQ29980 383 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 PXDC1Q5TGL8 231 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 STUMQ69YW2 141 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 LAIR1Q6GTX8 287 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 OR5M1Q8NGP8 315 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 GHSRQ92847 366 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 PSD2Q9BQI7 771 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 A4GALTQ9NPC4 353 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF90Q03938 601 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 DUSP6Q16828 381 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 LYRM7Q5U5X0 104 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 SLC48A1Q6P1K1 146 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 PTOV1Q86YD1 416 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 PIANPQ8IYJ0 282 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 B3GALT5Q9Y2C3 310 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 CNMDO75829 334 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 LGALS7P47929 136 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 GTDC1Q4AE62 458 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 BCL7AQ4VC05 210 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF766Q5HY98 468 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 SLC24A4Q8NFF2 622 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 MED20Q9H944 212 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 GAB2Q9UQC2 676 aa10.23□□□□□ -0.77
SCN4A-201ENST00000435607 COA3Q9Y2R0 106 aaPredicted RBP10.23□□□□□ -0.77
SCN4A-201ENST00000435607 TNFSF8P32971 234 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 AKR1C3P42330 323 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 CNN1P51911 297 aaKnown RBP10.22□□□□□ -0.77
SCN4A-201ENST00000435607 RNPS1Q15287 305 aaKnown RBP10.22□□□□□ -0.77
SCN4A-201ENST00000435607 PLAC9Q5JTB6 97 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 FOXQ1Q9C009 403 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 TNFSF11O14788 317 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF207O43670 478 aaKnown RBP10.22□□□□□ -0.77
SCN4A-201ENST00000435607 PSMB1P20618 241 aaKnown RBP10.22□□□□□ -0.77
SCN4A-201ENST00000435607 CLDN15P56746 228 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 TRA2AQ13595 282 aaKnown RBP eCLIP10.22□□□□□ -0.77
SCN4A-201ENST00000435607 MUC15Q8N387 334 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 SIGLECL1Q8N7X8 197 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 C7orf43Q8WVR3 580 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 ADAMTS6Q9UKP5 1117 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 SPRY3O43610 288 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 RBP4P02753 201 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 H2AFB1P0C5Y9 115 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 OR10K2Q6IF99 312 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 PARM1Q6UWI2 310 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 PLPP6Q8IY26 295 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 Q8IYB0 196 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 LGALS14Q8TCE9 139 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 GMLQ99445 158 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 GAL3ST2Q9H3Q3 398 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 MN1Q10571 1320 aaPredicted RBP10.22□□□□□ -0.77
SCN4A-201ENST00000435607 A0A096LPE4 126 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 IGKV6D-21A0A0A0MT36 114 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 A0A1W2PPZ6 126 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 CYR61O00622 381 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 HRASP01112 189 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 EXOSC2Q13868 293 aaKnown RBP10.22□□□□□ -0.77
SCN4A-201ENST00000435607 SLC38A9Q8NBW4 561 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 OCIAD1Q9NX40 245 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 GMPR2Q9P2T1 348 aaKnown RBP10.22□□□□□ -0.77
SCN4A-201ENST00000435607 HDGFL3Q9Y3E1 203 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 COL2A1P02458 1487 aaPredicted RBP10.22□□□□□ -0.77
SCN4A-201ENST00000435607 PIAS2O75928 621 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 MTNR1BP49286 362 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF574Q6ZN55 896 aaPredicted RBP10.22□□□□□ -0.77
SCN4A-201ENST00000435607 UBTD2Q8WUN7 234 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 NEURL3Q96EH8 262 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 MRGPRX4Q96LA9 322 aa10.22□□□□□ -0.77
SCN4A-201ENST00000435607 CTSFQ9UBX1 484 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms