RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CITED4Q96RK1 184 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 CMKLR1Q99788 373 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 NKX3-1Q99801 234 aaPredicted RBP16.59■□□□□ 0.25
CLK1-205ENST00000434813 CLEC4MQ9H2X3 399 aaPredicted RBP16.59■□□□□ 0.25
CLK1-205ENST00000434813 B3GAT1Q9P2W7 334 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 CGGBP1Q9UFW8 167 aaPredicted RBP16.59■□□□□ 0.25
CLK1-205ENST00000434813 RPH3AQ9Y2J0 694 aaPredicted RBP16.59■□□□□ 0.25
CLK1-205ENST00000434813 WIF1Q9Y5W5 379 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 B3GALT1Q9Y5Z6 326 aa16.59■□□□□ 0.25
CLK1-205ENST00000434813 MRPS18BQ9Y676 258 aaKnown RBP16.59■□□□□ 0.25
CLK1-205ENST00000434813 SHISA8B8ZZ34 492 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 LDLRAD4O15165 306 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 ZFAND5O76080 213 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 H2BFMP0C1H6 154 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 GPR85P60893 370 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 PSMA6P60900 246 aaKnown RBP16.58■□□□□ 0.25
CLK1-205ENST00000434813 TSPAN5P62079 268 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 CCL7P80098 99 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 SNTA1Q13424 505 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 C1orf100Q5SVJ3 147 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 LRFN4Q6PJG9 635 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 TMEM205Q6UW68 189 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 LYPD6Q86Y78 171 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 ADPRHL1Q8NDY3 354 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 CHIAQ9BZP6 476 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 SCPEP1Q9HB40 452 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 MYOTQ9UBF9 498 aa16.58■□□□□ 0.25
CLK1-205ENST00000434813 A0A0A6YYH2 397 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 UBE2QL1A1L167 161 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 LINC00862A6NCI5 91 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 A6NJ64 397 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 TNFRSF10AO00220 468 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 EFNA2O43921 213 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 MPC2O95563 127 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 LPLP06858 475 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 BIDP55957 195 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 MYBPHQ13203 477 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 NHLRC1Q6VVB1 395 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 UXS1Q8NBZ7 420 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 POC1BQ8TC44 478 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 CCDC74BQ96LY2 380 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 CRB3Q9BUF7 120 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 COL25A1Q9BXS0 654 aaPredicted RBP16.58■□□□□ 0.24
CLK1-205ENST00000434813 SLC26A1Q9H2B4 701 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 SDHAF3Q9NRP4 125 aa16.58■□□□□ 0.24
CLK1-205ENST00000434813 SIGLEC6O43699 453 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 IFNA7P01567 189 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 CD3DP04234 171 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 C1QTNF12Q5T7M4 302 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 STEAP1BQ6NZ63 245 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 CORO6Q6QEF8 472 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 OR10G3Q8NGC4 313 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 OR51S1Q8NGJ8 323 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 SLC22A8Q8TCC7 542 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 C11orf40Q8WZ69 217 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 PTX4Q96A99 478 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 DPCDQ9BVM2 203 aaPredicted RBP16.57■□□□□ 0.24
CLK1-205ENST00000434813 MRPL13Q9BYD1 178 aaKnown RBP16.57■□□□□ 0.24
CLK1-205ENST00000434813 TMPRSS13Q9BYE2 586 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 METTL7AQ9H8H3 244 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 FAM206AQ9NX38 181 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 C19orf25Q9UFG5 118 aaPredicted RBP16.57■□□□□ 0.24
CLK1-205ENST00000434813 RHBDD3Q9Y3P4 386 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 AUP1Q9Y679 476 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 VPS13AQ96RL7 3174 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 DCDC2BA2VCK2 349 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 MEIS3P1A6NDR6 274 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 LEUTXA8MZ59 168 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 DOK2O60496 412 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 CYC1P08574 325 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 CAPZA1P52907 286 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 TAS2R19P59542 299 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 SPOCK1Q08629 439 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 RIPPLY1Q0D2K3 151 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 FAM69BQ5VUD6 431 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 PEAR1Q5VY43 1037 aaPredicted RBP16.57■□□□□ 0.24
CLK1-205ENST00000434813 C3orf33Q6P1S2 294 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.57■□□□□ 0.24
CLK1-205ENST00000434813 GABRG1Q8N1C3 465 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 JAGN1Q8N5M9 183 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 OR10H5Q8NGA6 315 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 OR52B4Q8NGK2 314 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 SLAMF6Q96DU3 332 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 SEH1LQ96EE3 360 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 ZC3H10Q96K80 434 aaKnown RBP16.57■□□□□ 0.24
CLK1-205ENST00000434813 CYB5R1Q9UHQ9 305 aa16.57■□□□□ 0.24
CLK1-205ENST00000434813 KIF26BQ2KJY2 2108 aa16.56■□□□□ 0.24
CLK1-205ENST00000434813 LOC101059948A0A1B0GTJ6 334 aa16.56■□□□□ 0.24
CLK1-205ENST00000434813 PLSCR5A0PG75 271 aa16.56■□□□□ 0.24
CLK1-205ENST00000434813 P2RY10O00398 339 aa16.56■□□□□ 0.24
CLK1-205ENST00000434813 SNAPC5O75971 98 aa16.56■□□□□ 0.24
CLK1-205ENST00000434813 OR2J2O76002 312 aa16.56■□□□□ 0.24
CLK1-205ENST00000434813 MELTFP08582 738 aa16.56■□□□□ 0.24
CLK1-205ENST00000434813 EXOSC2Q13868 293 aaKnown RBP16.56■□□□□ 0.24
CLK1-205ENST00000434813 ESCO2Q56NI9 601 aa16.56■□□□□ 0.24
CLK1-205ENST00000434813 PPP1R3BQ86XI6 285 aa16.56■□□□□ 0.24
CLK1-205ENST00000434813 CDH26Q8IXH8 852 aa16.56■□□□□ 0.24
CLK1-205ENST00000434813 OR8H3Q8N146 312 aa16.56■□□□□ 0.24
CLK1-205ENST00000434813 TMEM229BQ8NBD8 167 aa16.56■□□□□ 0.24
CLK1-205ENST00000434813 FOXRED1Q96CU9 486 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms