RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 OTPQ5XKR4 325 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 C3orf33Q6P1S2 294 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 ARSKQ6UWY0 536 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 C16orf47Q6ZP98 133 aaPredicted RBP9.31□□□□□ -0.92
CD44-210ENST00000434472 RHOUQ7L0Q8 258 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 LINC00346Q8IVM7 164 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 THAP3Q8WTV1 239 aaPredicted RBP9.31□□□□□ -0.92
CD44-210ENST00000434472 SLC25A43Q8WUT9 341 aaPredicted RBP9.31□□□□□ -0.92
CD44-210ENST00000434472 C17orf50Q8WW18 174 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 C11orf40Q8WZ69 217 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 PMEPA1Q969W9 287 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 ELMOD3Q96FG2 381 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 WDR77Q9BQA1 342 aaPredicted RBP9.31□□□□□ -0.92
CD44-210ENST00000434472 UQCC2Q9BRT2 126 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 SLC26A1Q9H2B4 701 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 CENPMQ9NSP4 180 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 KIF25Q9UIL4 384 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 VDAC3Q9Y277 283 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 WIF1Q9Y5W5 379 aa9.31□□□□□ -0.92
CD44-210ENST00000434472 MRPS18BQ9Y676 258 aaKnown RBP9.31□□□□□ -0.92
CD44-210ENST00000434472 BRWD1Q9NSI6 2320 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 ADAMTS20P59510 1910 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 TEX51A0A1B0GUA7 166 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 DCDC2BA2VCK2 349 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 TMEM200CA6NKL6 621 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 MCRIP1C9JLW8 97 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 K7ESF4 209 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 P2RY10O00398 339 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 SHOXO15266 292 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 ZNF354AO60765 605 aaPredicted RBP9.3□□□□□ -0.92
CD44-210ENST00000434472 TOXO94900 526 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 BPNT1O95861 308 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 CYB5AP00167 134 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 IGHG1P01857 330 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 SDHBP21912 280 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 EIF1P41567 113 aaKnown RBP9.3□□□□□ -0.92
CD44-210ENST00000434472 GSK3AP49840 483 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 SEC61A1P61619 476 aaKnown RBP9.3□□□□□ -0.92
CD44-210ENST00000434472 CCL7P80098 99 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 SPOCK1Q08629 439 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 POU4F3Q15319 338 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 CSRP2Q16527 193 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 ZNF239Q16600 458 aaKnown RBP9.3□□□□□ -0.92
CD44-210ENST00000434472 LYSMD4Q5XG99 296 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 NHLRC1Q6VVB1 395 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 C3P1Q6ZMU1 363 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 PPP1R3BQ86XI6 285 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 LYPD6Q86Y78 171 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 SLC22A24Q8N4F4 322 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 NOXO1Q8NFA2 376 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 OR1M1Q8NGA1 313 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 OR2AJ1Q8NGZ0 328 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 TNFAIP8L1Q8WVP5 186 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 NUDT16L1Q9BRJ7 211 aaKnown RBP9.3□□□□□ -0.92
CD44-210ENST00000434472 IER2Q9BTL4 223 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 CRB3Q9BUF7 120 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 GSX2Q9BZM3 304 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 PBOV1Q9GZY1 135 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 TMEM138Q9NPI0 162 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 FAM206AQ9NX38 181 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 MED29Q9NX70 200 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 GLTPQ9NZD2 209 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 MYOTQ9UBF9 498 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 FBLN5Q9UBX5 448 aa9.3□□□□□ -0.92
CD44-210ENST00000434472 CGGBP1Q9UFW8 167 aaPredicted RBP9.3□□□□□ -0.92
CD44-210ENST00000434472 GDF2Q9UK05 429 aaPredicted RBP9.3□□□□□ -0.92
CD44-210ENST00000434472 ATXN7L1Q9ULK2 861 aaPredicted RBP9.3□□□□□ -0.92
CD44-210ENST00000434472 IGHV5-10-1A0A0J9YXX1 117 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 RPS10-NUDT3A0A1W2PQS6 291 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 TMEM82A0PJX8 343 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 ZNF736B4DX44 427 aaPredicted RBP9.29□□□□□ -0.92
CD44-210ENST00000434472 H3BUI4 141 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 GOSR2O14653 212 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 TP53I11O14683 189 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 SYT7O43581 403 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 ACSM4P0C7M7 580 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 NR2C1P13056 603 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 PPP3CBP16298 524 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 CXCL2P19875 107 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 MPZP25189 248 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 ADH6P28332 368 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 PTGDSP41222 190 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 MYBPHQ13203 477 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 FAM189A2Q15884 450 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 KCNMB1Q16558 191 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 C4orf46Q504U0 113 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 CLVS2Q5SYC1 327 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 FAM69BQ5VUD6 431 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 ZNF385CQ66K41 422 aaPredicted RBP9.29□□□□□ -0.92
CD44-210ENST00000434472 PTCRAQ6ISU1 281 aaPredicted RBP9.29□□□□□ -0.92
CD44-210ENST00000434472 GUSBP11Q6P575 273 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 TSSK4Q6SA08 328 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 TMPRSS9Q7Z410 1059 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 COMMD7Q86VX2 200 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 ZNF584Q8IVC4 421 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 C12orf45Q8N5I9 185 aaPredicted RBP9.29□□□□□ -0.92
CD44-210ENST00000434472 SLC38A9Q8NBW4 561 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 OR2M3Q8NG83 312 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 OR4D10Q8NGI6 311 aa9.29□□□□□ -0.92
CD44-210ENST00000434472 OR52B4Q8NGK2 314 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms