RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 LCN1P1Q5VSP4 162 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 SLX4IPQ5VYV7 408 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 TCEANCQ8N8B7 351 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 OR1J1Q8NGS3 322 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 OR1F12Q8NHA8 337 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 ZNRF4Q8WWF5 429 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 MBD6Q96DN6 1003 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 POM121L2Q96KW2 1035 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 IL4I1Q96RQ9 567 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 INTS14Q96SY0 518 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 DDOQ99489 341 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 SYT3Q9BQG1 590 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 TRAF4Q9BUZ4 470 aaPredicted RBP13.4□□□□□ -0.26
TREX1-201ENST00000433541 CACNG6Q9BXT2 260 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 BCL2L14Q9BZR8 327 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 HDHD2Q9H0R4 259 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 ZNF442Q9H7R0 627 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 WDR76Q9H967 626 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 ELOVL3Q9HB03 270 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 MRPL22Q9NWU5 206 aaKnown RBP13.4□□□□□ -0.26
TREX1-201ENST00000433541 DUSP13Q9UII6 198 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 GDF2Q9UK05 429 aaPredicted RBP13.4□□□□□ -0.26
TREX1-201ENST00000433541 MYO9AB2RTY4 2548 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 CSMD2Q7Z408 3487 aa13.4□□□□□ -0.26
TREX1-201ENST00000433541 OR6C6A6NF89 314 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 ZNF593O00488 134 aaPredicted RBP13.39□□□□□ -0.27
TREX1-201ENST00000433541 PRODHO43272 600 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 PRKYO43930 277 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 COX5BP10606 129 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 ANPEPP15144 967 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 GLRXP35754 106 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 POLR2IP36954 125 aaKnown RBP13.39□□□□□ -0.27
TREX1-201ENST00000433541 UCP2P55851 309 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 EIF2B1Q14232 305 aaKnown RBP13.39□□□□□ -0.27
TREX1-201ENST00000433541 CCDC92Q53HC0 331 aaPredicted RBP13.39□□□□□ -0.27
TREX1-201ENST00000433541 SPATA46Q5T0L3 261 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 SLC18B1Q6NT16 456 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 CFAP77Q6ZQR2 320 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 ZNF771Q7L3S4 317 aaPredicted RBP13.39□□□□□ -0.27
TREX1-201ENST00000433541 DCXRQ7Z4W1 244 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 DTX2Q86UW9 622 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 BBS1Q8NFJ9 593 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 FAM81AQ8TBF8 368 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 SLC7A6Q92536 515 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 PTP4A1Q93096 173 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 C4orf45Q96LM5 186 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 ATF6BQ99941 703 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 VRK1Q99986 396 aaPredicted RBP13.39□□□□□ -0.27
TREX1-201ENST00000433541 GABARAPL3Q9BY60 117 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 CENPMQ9NSP4 180 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 USE1Q9NZ43 259 aa13.39□□□□□ -0.27
TREX1-201ENST00000433541 ARFGEF3Q5TH69 2177 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 B9A039 149 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 SYNGR3O43761 229 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 ERCC1P07992 297 aaPredicted RBP13.38□□□□□ -0.27
TREX1-201ENST00000433541 PCSK6P29122 969 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 GCH1P30793 250 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 GGT2P36268 569 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 NAA10P41227 235 aaPredicted RBP13.38□□□□□ -0.27
TREX1-201ENST00000433541 SLC6A9P48067 706 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 PTH2RP49190 550 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 NKX6-1P78426 367 aaPredicted RBP13.38□□□□□ -0.27
TREX1-201ENST00000433541 SLC35D3Q5M8T2 416 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 C12orf73Q69YU5 71 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 SPATC1Q76KD6 591 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 GALNT4Q8N4A0 578 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 TMEM163Q8TC26 289 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 FOXC2Q99958 501 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 COPS4Q9BT78 406 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 TOR3AQ9H497 397 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 CYB5R1Q9UHQ9 305 aa13.38□□□□□ -0.27
TREX1-201ENST00000433541 F5H5K5 113 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 CD8AP01732 235 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 MRPL3P09001 348 aaKnown RBP13.37□□□□□ -0.27
TREX1-201ENST00000433541 DBHP09172 617 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 KLF3P57682 345 aaPredicted RBP13.37□□□□□ -0.27
TREX1-201ENST00000433541 ERVS71-1P61550 626 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 PPP1CBP62140 327 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 ELF3P78545 371 aaPredicted RBP13.37□□□□□ -0.27
TREX1-201ENST00000433541 ECH1Q13011 328 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 NKPD1Q17RQ9 610 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 LPCAT4Q643R3 524 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 SHFQ7M4L6 423 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 DPY19L4Q7Z388 723 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 ZNF101Q8IZC7 436 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 SYNPRQ8TBG9 265 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 SNX33Q8WV41 574 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 SPTSSAQ969W0 71 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 MRPL24Q96A35 216 aaKnown RBP13.37□□□□□ -0.27
TREX1-201ENST00000433541 COQ7Q99807 217 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 MRPL37Q9BZE1 423 aaKnown RBP13.37□□□□□ -0.27
TREX1-201ENST00000433541 ATPIF1Q9UII2 106 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 GPR160Q9UJ42 338 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 GMPPBQ9Y5P6 360 aa13.37□□□□□ -0.27
TREX1-201ENST00000433541 SELENOFO60613 162 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 HSD11B1P28845 292 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 WNT5AP41221 380 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 ALKBH6Q3KRA9 238 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 ZNF718Q3SXZ3 478 aa13.36□□□□□ -0.27
TREX1-201ENST00000433541 Q5PR19 223 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms