RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 B3GNT7Q8NFL0 401 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 OR7G2Q8NG99 324 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 OR2AP1Q8NGE2 309 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 OR5L2Q8NGL0 311 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 OR6Q1Q8NGQ2 317 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 OR52N1Q8NH53 320 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 OR52E5Q8NH55 327 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 ACTRT1Q8TDG2 376 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 NEK7Q8TDX7 302 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 PYDC1Q8WXC3 89 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 HGDQ93099 445 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 PSMG2Q969U7 264 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 CREB3L1Q96BA8 519 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 ECHDC3Q96DC8 303 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 TMEM80Q96HE8 168 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 SERPINB11Q96P15 392 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 OR5B2Q96R09 309 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 RBBP8Q99708 897 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 P2RY13Q9BPV8 354 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 UTP23Q9BRU9 249 aaKnown RBP2.07□□□□□ -2.08
CLK1-204ENST00000432425 ULBP2Q9BZM5 246 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 CHRNA10Q9GZZ6 450 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 METTL9Q9H1A3 318 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 PLEKHA1Q9HB21 404 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 ANKHQ9HCJ1 492 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 INPP5EQ9NRR6 644 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 NECAP2Q9NVZ3 263 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 CD274Q9NZQ7 290 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 GNG12Q9UBI6 72 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 EXOSC1Q9Y3B2 195 aaKnown RBP2.07□□□□□ -2.08
CLK1-204ENST00000432425 BAZ1BQ9UIG0 1483 aaKnown RBP2.07□□□□□ -2.08
CLK1-204ENST00000432425 ADGRL3Q9HAR2 1447 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 PPIAL4CA0A0B4J2A2 164 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 A0A1W2PNV4 684 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 LRP5LA4QPB2 252 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 OR2AT4A6NND4 320 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 STX7O15400 261 aaKnown RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 OR10H3O60404 316 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 FCN3O75636 299 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 TNFAIP8O95379 198 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 ETHE1O95571 254 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 OXSR1O95747 527 aaPredicted RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 CRYZL1O95825 349 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 TSPAN13O95857 204 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CA1P00915 261 aaPredicted RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 TNNC2P02585 160 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SLC35G4P0C7Q5 338 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 PET100P0DJ07 73 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SMIM10L1P0DMW3 83 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 PPIAL4GP0DN37 164 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 ICAM2P13598 275 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 HTR2CP28335 458 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 GABRR2P28476 465 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 HMOX2P30519 316 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 KDELR2P33947 212 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SHMT2P34897 504 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 RPL4P36578 427 aaKnown RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 HPCAL1P37235 193 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 MAGEA5P43359 124 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 GNPDA1P46926 289 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 OMPP47874 163 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CSNK1A1P48729 337 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 RGS6P49758 472 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 PPOXP50336 477 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 EMDP50402 254 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 RPL14P50914 215 aaKnown RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 ACLYP53396 1101 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 UBE2MP61081 183 aaKnown RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 LSM6P62312 80 aaKnown RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 ARF6P62330 175 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 RAD51Q06609 339 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 STX4Q12846 297 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SELENBP1Q13228 472 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 DPYSL3Q14195 570 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 TAF1AQ15573 450 aaPredicted RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 SLC9A3R2Q15599 337 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 VAMP3Q15836 100 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 ZBTB6Q15916 424 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 IMPG1Q17R60 797 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 COX19Q49B96 90 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CYBRD1Q53TN4 286 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 C1orf220Q5T0J3 134 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 HES5Q5TA89 166 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 C1orf146Q5VVC0 180 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 FAM71F2Q6NXP2 309 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SETD3Q86TU7 594 aaPredicted RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 ZNF589Q86UQ0 364 aaPredicted RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 TGIF2LXQ8IUE1 241 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CRLF3Q8IUI8 442 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 C2orf73Q8N5S3 287 aaPredicted RBP2.06□□□□□ -2.08
CLK1-204ENST00000432425 CCDC71LQ8N9Z2 235 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SYT14Q8NB59 555 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 CATSPER1Q8NEC5 780 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 OR10J5Q8NHC4 309 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 DCUN1D4Q92564 292 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 AP3S1Q92572 193 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 NAT6Q93015 286 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 FAM131CQ96AQ9 280 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SMIM10Q96HG1 83 aa2.06□□□□□ -2.08
CLK1-204ENST00000432425 SLC35E1Q96K37 410 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms