RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 PLXDC2Q6UX71 529 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 LRRTM1Q86UE6 522 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 TMPRSS12Q86WS5 348 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 CELF2-AS1Q8N7Q2 184 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 ZNF845Q96IR2 970 aaPredicted RBP14.77□□□□□ -0.04
USHBP1-203ENST00000431146 IP6K3Q96PC2 410 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 MFRPQ9BY79 579 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 OR2B2Q9GZK3 357 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 C1orf198Q9H425 327 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 ZNF703Q9H7S9 590 aaPredicted RBP14.77□□□□□ -0.04
USHBP1-203ENST00000431146 ASCL3Q9NQ33 180 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 OR52A1Q9UKL2 312 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 LOC105371267A0A1B0GV96 52 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 AIPO00170 330 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 RER1O15258 196 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 SLC43A1O75387 559 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 VAMP5O95183 116 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 APOA1P02647 267 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 ADRB1P08588 477 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 FOSL1P15407 271 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 NTF4P34130 210 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 MAGEA5P43359 124 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 GFRA1P56159 465 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 SGCAQ16586 387 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 GALNTL5Q7Z4T8 443 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 TMEM123Q8N131 208 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 ADGRG7Q96K78 797 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 SLITRK2Q9H156 845 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 LIN7BQ9HAP6 207 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 ABRACLQ9P1F3 81 aa14.77□□□□□ -0.05
USHBP1-203ENST00000431146 GVINP1Q7Z2Y8 2422 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 NKX2-8O15522 239 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 LMX1BO60663 402 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 POU4F3Q15319 338 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 TRIQKQ629K1 86 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 ASPHD2Q6ICH7 369 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 IZUMO1Q8IYV9 350 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 OR2AJ1Q8NGZ0 328 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 OR2V1Q8NHB1 315 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 ZNF837Q96EG3 531 aaPredicted RBP14.76□□□□□ -0.05
USHBP1-203ENST00000431146 MED30Q96HR3 178 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 TTTY12Q9BZ98 90 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 B3GNT4Q9C0J1 378 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 C11orf54Q9H0W9 315 aaPredicted RBP14.76□□□□□ -0.05
USHBP1-203ENST00000431146 DHDHQ9UQ10 334 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 CEP250Q9BV73 2442 aa14.76□□□□□ -0.05
USHBP1-203ENST00000431146 SPENQ96T58 3664 aaKnown RBP14.76□□□□□ -0.05
USHBP1-203ENST00000431146 ANXA2P2A6NMY6 339 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 PLA2G10O15496 165 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 ANXA2P07355 339 aaKnown RBP14.75□□□□□ -0.05
USHBP1-203ENST00000431146 SRYQ05066 204 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 CD300CQ08708 224 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 RNASE12Q5GAN4 147 aaKnown RBP14.75□□□□□ -0.05
USHBP1-203ENST00000431146 AGAP7PQ5VUJ5 663 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 SETD6Q8TBK2 473 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 ASB5Q8WWX0 329 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 ABHD1Q96SE0 405 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 FAM117AQ9C073 453 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 SPATA2Q9UM82 520 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 MRPS7Q9Y2R9 242 aaKnown RBP14.75□□□□□ -0.05
USHBP1-203ENST00000431146 LOC107986453A0A1B0GWG9 222 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 P2RY10O00398 339 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 LANCL1O43813 399 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 PITPNBP48739 271 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 ZNF544Q6NX49 715 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 FCRLAQ7L513 359 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.75□□□□□ -0.05
USHBP1-203ENST00000431146 LRRC18Q8N456 261 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 TMEM54Q969K7 222 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 NEURL2Q9BR09 285 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 LRFN3Q9BTN0 628 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 ZNF416Q9BWM5 594 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 RBM24Q9BX46 236 aaKnown RBP14.75□□□□□ -0.05
USHBP1-203ENST00000431146 SLC6A15Q9H2J7 730 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 FAM206AQ9NX38 181 aa14.75□□□□□ -0.05
USHBP1-203ENST00000431146 MRPS18CQ9Y3D5 142 aaKnown RBP14.75□□□□□ -0.05
USHBP1-203ENST00000431146 RAF1P04049 648 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 SLC2A1P11166 492 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 ANOS1P23352 680 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 CD82P27701 267 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 ASAH1Q13510 395 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 RIN1Q13671 783 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 BCL2L15Q5TBC7 163 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 SIGIRRQ6IA17 410 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 DEGS2Q6QHC5 323 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 SERPINA12Q8IW75 414 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 C19orf18Q8NEA5 215 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 WACQ9BTA9 647 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 PCDHGA9Q9Y5G4 932 aaKnown RBP14.74□□□□□ -0.05
USHBP1-203ENST00000431146 FLVCR1Q9Y5Y0 555 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 AKAP13Q12802 2813 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 ITGB2P05107 769 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 WT1P19544 449 aaPredicted RBP14.74□□□□□ -0.05
USHBP1-203ENST00000431146 PTBP1P26599 531 aaKnown RBP eCLIP14.74□□□□□ -0.05
USHBP1-203ENST00000431146 PRKXP51817 358 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 PLGLB1Q02325 96 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 KLHL24Q6TFL4 600 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 CMTM4Q8IZR5 234 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 OR13C3Q8NGS6 347 aa14.74□□□□□ -0.05
USHBP1-203ENST00000431146 ABHD3Q8WU67 409 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms