RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 HAO2Q9NYQ3 351 aa10.73□□□□□ -0.69
USP40-205ENST00000430158 ATPIF1Q9UII2 106 aa10.73□□□□□ -0.69
USP40-205ENST00000430158 GDF2Q9UK05 429 aaPredicted RBP10.73□□□□□ -0.69
USP40-205ENST00000430158 RRP15Q9Y3B9 282 aaKnown RBP10.73□□□□□ -0.69
USP40-205ENST00000430158 ORC6Q9Y5N6 252 aa10.73□□□□□ -0.69
USP40-205ENST00000430158 LOC100130705A0A1B0GUX0 176 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 ZNF593O00488 134 aaPredicted RBP10.72□□□□□ -0.69
USP40-205ENST00000430158 ATP6V1G2O95670 118 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 CD8AP01732 235 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 CRYAAP02489 173 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 STOMP27105 288 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 WNT5AP41221 380 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 ENTPD1P49961 510 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 APOFQ13790 326 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 KEAP1Q14145 624 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 GGTLC2Q14390 218 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 RAB35Q15286 201 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 OCLNQ16625 522 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 MST1LQ2TV78 715 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 SLC22A25Q6T423 547 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.72□□□□□ -0.69
USP40-205ENST00000430158 ZNF611Q8N823 705 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 GJC3Q8NFK1 279 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 OR4F15Q8NGB8 312 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 OR6K6Q8NGW6 343 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 OR1F12Q8NHA8 337 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 FAM81AQ8TBF8 368 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 TMEM171Q8WVE6 324 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 SLC7A6Q92536 515 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 ZNF582Q96NG8 517 aaPredicted RBP10.72□□□□□ -0.69
USP40-205ENST00000430158 AMELYQ99218 206 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 PRRG3Q9BZD7 231 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 C1orf198Q9H425 327 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 CISD1Q9NZ45 108 aaKnown RBP10.72□□□□□ -0.69
USP40-205ENST00000430158 AASSQ9UDR5 926 aa10.72□□□□□ -0.69
USP40-205ENST00000430158 DOK2O60496 412 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 SELENOFO60613 162 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 HLA-DQA2P01906 255 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 ZNF823P16415 610 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 PCSK6P29122 969 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 OTX1P32242 354 aaPredicted RBP10.71□□□□□ -0.69
USP40-205ENST00000430158 CDH11P55287 796 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 CDC42P60953 191 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 ADAM8P78325 824 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 PLP2Q04941 152 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 KLHL12Q53G59 568 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 ELFN2Q5R3F8 820 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 PAMR1Q6UXH9 720 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 USP51Q70EK9 711 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 DPY19L4Q7Z388 723 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 DTX2Q86UW9 622 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 ENTHD1Q8IYW4 607 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 ZNF101Q8IZC7 436 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 OR10H5Q8NGA6 315 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 SMAP2Q8WU79 429 aaPredicted RBP10.71□□□□□ -0.69
USP40-205ENST00000430158 APH1BQ8WW43 257 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 OTULINQ96BN8 352 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 INTS14Q96SY0 518 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 COQ7Q99807 217 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 DHRS9Q9BPW9 319 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 ADGRL4Q9HBW9 690 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 DDX28Q9NUL7 540 aaKnown RBP10.71□□□□□ -0.69
USP40-205ENST00000430158 KLHDC2Q9Y2U9 406 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 GMPPBQ9Y5P6 360 aa10.71□□□□□ -0.69
USP40-205ENST00000430158 ITPR3Q14573 2671 aa10.71□□□□□ -0.7
USP40-205ENST00000430158 IQCMA0A1B0GVH7 501 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 TMEM129A0AVI4 362 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 PRR32B1ATL7 298 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 H0YHG0 523 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 H0YJX3 145 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 ENTPD6O75354 484 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 WBP4O75554 376 aaKnown RBP10.7□□□□□ -0.7
USP40-205ENST00000430158 ATE1O95260 518 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 NGFP01138 241 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 PTHP01270 115 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 SOD3P08294 240 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 DBHP09172 617 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 CD53P19397 219 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 ALOX5APP20292 161 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 ANOS1P23352 680 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 HTR1FP30939 366 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 THBS4P35443 961 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 ADIPOQQ15848 244 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 C11orf71Q6IPW1 123 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 COLCA1Q6ZS62 124 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 DCXRQ7Z4W1 244 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 ERI1Q8IV48 349 aaKnown RBP10.7□□□□□ -0.7
USP40-205ENST00000430158 ALDH16A1Q8IZ83 802 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 OR1J2Q8NGS2 313 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 OTOSQ8NHW6 89 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 FBLIM1Q8WUP2 373 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 RNF133Q8WVZ7 376 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 TFAP2CQ92754 450 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 ABHD6Q9BV23 337 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 HDHD2Q9H0R4 259 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 ZNF442Q9H7R0 627 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 CA10Q9NS85 328 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 PLEK2Q9NYT0 353 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 DNAJC27Q9NZQ0 273 aa10.7□□□□□ -0.7
USP40-205ENST00000430158 ATP23Q9Y6H3 246 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms