RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 ACKR1Q16570 336 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 CDC20BQ86Y33 519 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 WBP2Q969T9 261 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 SDF2Q99470 211 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 TAF9BQ9HBM6 251 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 ATP1B1P05026 303 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 HMGA1P17096 107 aaKnown RBP14.04□□□□□ -0.16
PTPRF-206ENST00000429895 NKX2-1P43699 371 aaPredicted RBP14.04□□□□□ -0.16
PTPRF-206ENST00000429895 ZNF385BQ569K4 471 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 AFMIDQ63HM1 303 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 LAIR1Q6GTX8 287 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 RSPO2Q6UXX9 243 aaPredicted RBP14.04□□□□□ -0.16
PTPRF-206ENST00000429895 MYH15Q9Y2K3 1946 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 KIR2DS1A0A191URI9 304 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 TARM1B6A8C7 271 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 HMGN4O00479 90 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 GPR37O15354 613 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 KIR2DS4P43632 304 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 SNTB1Q13884 538 aaKnown RBP14.04□□□□□ -0.16
PTPRF-206ENST00000429895 KIR2DS1Q14954 304 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 SAXO2Q658L1 398 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 OR10K2Q6IF99 312 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 OR6K3Q8NGY3 331 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 MKRN2Q9H000 416 aaKnown RBP14.04□□□□□ -0.16
PTPRF-206ENST00000429895 POLDIP2Q9Y2S7 368 aa14.04□□□□□ -0.16
PTPRF-206ENST00000429895 PDE4DIPQ5VU43 2346 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 TRABD2BA6NFA1 517 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 FIGNL2A6NMB9 653 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 MKRN2OSH3BPM6 223 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 PMS2P2O95744 297 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 CT45A10P0DMU9 189 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 PIGAP37287 484 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 DMRTC1Q5HYR2 192 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 MAVSQ7Z434 540 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 FAM122AQ96E09 287 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 TEAD3Q99594 435 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 MED29Q9NX70 200 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 IAPPP10997 89 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 CD22P20273 847 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 EXOSC2Q13868 293 aaKnown RBP14.03□□□□□ -0.16
PTPRF-206ENST00000429895 LIPNQ5VXI9 398 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 RPL7L1Q6DKI1 246 aaKnown RBP14.03□□□□□ -0.16
PTPRF-206ENST00000429895 CA13Q8N1Q1 262 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 OPALINQ96PE5 141 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 C4BP0C0L5 1744 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 M0R135 149 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 SPATA46Q5T0L3 261 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 TMEM207Q6UWW9 146 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 KDF1Q8NAX2 398 aaPredicted RBP14.03□□□□□ -0.16
PTPRF-206ENST00000429895 ZNF799Q96GE5 643 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 ZNF331Q9NQX6 463 aaPredicted RBP14.03□□□□□ -0.16
PTPRF-206ENST00000429895 C19orf53Q9UNZ5 99 aaPredicted RBP14.03□□□□□ -0.16
PTPRF-206ENST00000429895 C2CD4DB7Z1M9 353 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 SSSCA1O60232 199 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 DFFBO76075 338 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 GFERP55789 205 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 LHFPL2Q6ZUX7 228 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 CLDN22Q8N7P3 220 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 NECAP1Q8NC96 275 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 MRGPRX1Q96LB2 322 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 TCEAL7Q9BRU2 100 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 RBFOX1Q9NWB1 397 aaKnown RBP14.03□□□□□ -0.16
PTPRF-206ENST00000429895 MAGEB4O15481 346 aaPredicted RBP14.03□□□□□ -0.16
PTPRF-206ENST00000429895 NRASP01111 189 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 DUSP1P28562 367 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 FCER1GP30273 86 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 ETV1P50549 477 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 HMGN3Q15651 99 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 OR2L13Q8N349 312 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 BAHD1Q8TBE0 780 aaPredicted RBP14.03□□□□□ -0.16
PTPRF-206ENST00000429895 PKMYT1Q99640 499 aa14.03□□□□□ -0.16
PTPRF-206ENST00000429895 SLC22A20A6NK97 555 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 NME2P1O60361 137 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 PLXDC2Q6UX71 529 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 TMEM200AQ86VY9 491 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 OR10AD1Q8NGE0 317 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 SLC17A4Q9Y2C5 497 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 IGLV3-10A0A075B6K4 115 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 SDCBPO00560 298 aaPredicted RBP14.02□□□□□ -0.16
PTPRF-206ENST00000429895 GALR2O43603 387 aaPredicted RBP14.02□□□□□ -0.16
PTPRF-206ENST00000429895 PIAS2O75928 621 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 EIF2DP41214 584 aaKnown RBP14.02□□□□□ -0.16
PTPRF-206ENST00000429895 CCL7P80098 99 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 OR52H1Q8NGJ2 320 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 OR52N1Q8NH53 320 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 ZNRF4Q8WWF5 429 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 PLA2G12AQ9BZM1 189 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 CHST2Q9Y4C5 530 aa14.02□□□□□ -0.16
PTPRF-206ENST00000429895 DSCR3O14972 297 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 OPRM1P35372 400 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 SLC19A1P41440 591 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 RPS27P42677 84 aaKnown RBP14.02□□□□□ -0.17
PTPRF-206ENST00000429895 NOVA1P51513 510 aaKnown RBP14.02□□□□□ -0.17
PTPRF-206ENST00000429895 CLN3Q13286 438 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 SLCO5A1Q9H2Y9 848 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 GPR84Q9NQS5 396 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 B3GALT5Q9Y2C3 310 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 HRO43593 1189 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 EMDP50402 254 aa14.02□□□□□ -0.17
PTPRF-206ENST00000429895 TRDV1A0A1B0GX56 115 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms