RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 UBXN2BQ14CS0 331 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 CHRFAM7AQ494W8 412 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 PAN3Q58A45 887 aaKnown RBP12.41□□□□□ -0.42
SGMS1-203ENST00000429490 SLC25A32Q9H2D1 315 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 ZNF629Q9UEG4 869 aaPredicted RBP12.41□□□□□ -0.42
SGMS1-203ENST00000429490 SGCEO43556 437 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 MESTQ5EB52 335 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 VWA2Q5GFL6 755 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 C11orf87Q6NUJ2 197 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 NPSR1Q6W5P4 371 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 ZNF595Q8IYB9 648 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 ZNF578Q96N58 590 aaPredicted RBP12.41□□□□□ -0.42
SGMS1-203ENST00000429490 LDAHQ9H6V9 325 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 TMED7Q9Y3B3 224 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 TMED7-TICAM2A0A0A6YYA0 188 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 TUBAL3A6NHL2 446 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 HMSDA8MTL9 139 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 F5H5K5 113 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 B3GALNT1O75752 331 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 STPG1Q5TH74 334 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 C16orf47Q6ZP98 133 aaPredicted RBP12.41□□□□□ -0.42
SGMS1-203ENST00000429490 ZNF321PQ8N8H1 164 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 PNLDC1Q8NA58 520 aaKnown RBP12.41□□□□□ -0.42
SGMS1-203ENST00000429490 NECAB3Q96P71 396 aaPredicted RBP12.41□□□□□ -0.42
SGMS1-203ENST00000429490 ZNF700Q9H0M5 742 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 PIGMQ9H3S5 423 aa12.41□□□□□ -0.42
SGMS1-203ENST00000429490 OR5K4A6NMS3 321 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 METTL12A8MUP2 240 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 CTLA4P16410 223 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 CRABP1P29762 137 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 CD80P33681 288 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 CLRN1P58418 232 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 FXYD4P59646 89 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 CCINQ13939 588 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 OTOSQ8NHW6 89 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.4□□□□□ -0.42
SGMS1-203ENST00000429490 C14orf166Q9Y224 244 aaKnown RBP12.4□□□□□ -0.42
SGMS1-203ENST00000429490 MEMO1Q9Y316 297 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 SVILO95425 2214 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 ZNF726A6NNF4 738 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 PLRG1O43660 514 aaKnown RBP12.4□□□□□ -0.42
SGMS1-203ENST00000429490 IFNA21P01568 189 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 FOXL2P58012 376 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 ABCA11PQ4W5N1 156 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 MANEAQ5SRI9 462 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 ATPAF1Q5TC12 328 aaPredicted RBP12.4□□□□□ -0.42
SGMS1-203ENST00000429490 TMEM244Q5VVB8 128 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 OR1S1Q8NH92 325 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 BMFQ96LC9 184 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 PILRAQ9UKJ1 303 aa12.4□□□□□ -0.42
SGMS1-203ENST00000429490 TO15178 435 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 RD3LP0DJH9 198 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 COL9A1P20849 921 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 GFERP55789 205 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 RAB5BP61020 215 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 RPL27P61353 136 aaKnown RBP12.39□□□□□ -0.43
SGMS1-203ENST00000429490 SERTAD2Q14140 314 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 PEA15Q15121 130 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 RAB11FIP2Q7L804 512 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 OR51T1Q8NGJ9 327 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 ZNF775Q96BV0 537 aaPredicted RBP12.39□□□□□ -0.43
SGMS1-203ENST00000429490 TOE1Q96GM8 510 aaKnown RBP12.39□□□□□ -0.43
SGMS1-203ENST00000429490 OR8B4Q96RC9 309 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 NPAS1Q99742 590 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 RGCCQ9H4X1 137 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 EHFQ9NZC4 300 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 LRP12Q9Y561 859 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 CCDC163A0A0D9SF12 145 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 TMEM200CA6NKL6 621 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 OR2F2O95006 317 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 SNAPINO95295 136 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 PSMB6P28072 239 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 CD1CP29017 333 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 OR2F1Q13607 317 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 NAXDQ8IW45 347 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 OR10Z1Q8NGY1 313 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 RNASE11Q8TAA1 199 aaKnown RBP12.39□□□□□ -0.43
SGMS1-203ENST00000429490 DAZLQ92904 295 aaKnown RBP12.39□□□□□ -0.43
SGMS1-203ENST00000429490 LCORQ96JN0 433 aaPredicted RBP12.39□□□□□ -0.43
SGMS1-203ENST00000429490 MRGPRX1Q96LB2 322 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 VSTM2LQ96N03 204 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 GFI1Q99684 422 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 CDC6Q99741 560 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 BIN3Q9NQY0 253 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 TRAV36DV7A0A075B6V5 113 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 PRSS37A4D1T9 235 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 CT45A8P0DMV1 189 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 CT45A9P0DMV2 189 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 SERPINA2P20848 420 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 CD96P40200 585 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 MFGE8Q08431 387 aaPredicted RBP12.39□□□□□ -0.43
SGMS1-203ENST00000429490 CT45A2Q5DJT8 189 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 FAM109BQ6ICB4 259 aaPredicted RBP12.39□□□□□ -0.43
SGMS1-203ENST00000429490 HSD17B13Q7Z5P4 300 aaPredicted RBP12.39□□□□□ -0.43
SGMS1-203ENST00000429490 ESX1Q8N693 406 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 OR5D14Q8NGL3 314 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 NEK7Q8TDX7 302 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 RNF141Q8WVD5 230 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 ASB17Q8WXJ9 295 aa12.39□□□□□ -0.43
SGMS1-203ENST00000429490 SEH1LQ96EE3 360 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms