RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 PPP1R14AQ96A00 147 aa12.21□□□□□ -0.45
THBS3-202ENST00000428962 SLAMF6Q96DU3 332 aa12.21□□□□□ -0.45
THBS3-202ENST00000428962 OR5B2Q96R09 309 aa12.21□□□□□ -0.45
THBS3-202ENST00000428962 MRPL13Q9BYD1 178 aaKnown RBP12.21□□□□□ -0.45
THBS3-202ENST00000428962 IRF2BPLQ9H1B7 796 aa12.21□□□□□ -0.45
THBS3-202ENST00000428962 MOB1AQ9H8S9 216 aa12.21□□□□□ -0.45
THBS3-202ENST00000428962 FLVCR2Q9UPI3 526 aa12.21□□□□□ -0.45
THBS3-202ENST00000428962 NPTNQ9Y639 398 aa12.21□□□□□ -0.45
THBS3-202ENST00000428962 A0A1W2PPL8 197 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 A6NL46 340 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 SNRPGP15A8MWD9 76 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 NTN3O00634 580 aaPredicted RBP12.21□□□□□ -0.46
THBS3-202ENST00000428962 CREBL2O60519 120 aaPredicted RBP12.21□□□□□ -0.46
THBS3-202ENST00000428962 AKAIN1P0CW23 69 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 NR2C1P13056 603 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 GABRA1P14867 456 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 CPN1P15169 458 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 ZNF239Q16600 458 aaKnown RBP12.21□□□□□ -0.46
THBS3-202ENST00000428962 LINC00303Q3SY05 128 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 GLYATL3Q5SZD4 288 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 PIAS4Q8N2W9 510 aaPredicted RBP12.21□□□□□ -0.46
THBS3-202ENST00000428962 MR1Q95460 341 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 SLC25A28Q96A46 364 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 PTX4Q96A99 478 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 OXGR1Q96P68 337 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 EMC6Q9BV81 110 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 ZNF436Q9C0F3 470 aaPredicted RBP12.21□□□□□ -0.46
THBS3-202ENST00000428962 ZNF700Q9H0M5 742 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 SCPEP1Q9HB40 452 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 BEX1Q9HBH7 125 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 CYB5R1Q9UHQ9 305 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 FBXL2Q9UKC9 423 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 POLR1DQ9Y2S0 133 aa12.21□□□□□ -0.46
THBS3-202ENST00000428962 CHCHD2Q9Y6H1 151 aaPredicted RBP12.21□□□□□ -0.46
THBS3-202ENST00000428962 IGHV1-45A0A0A0MS14 117 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 EIF1AYO14602 144 aaKnown RBP12.2□□□□□ -0.46
THBS3-202ENST00000428962 AKR7A2O43488 359 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 ICMTO60725 284 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 HPXP02790 462 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 PGA4P0DJD7 388 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 PGA3P0DJD8 388 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 SNRPD2P62316 118 aaKnown RBP12.2□□□□□ -0.46
THBS3-202ENST00000428962 SLC35A1P78382 337 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 NHLH1Q02575 133 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 TCF15Q12870 199 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 WDFY1Q8IWB7 410 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 JAGN1Q8N5M9 183 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 BMPERQ8N8U9 685 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 OR2AJ1Q8NGZ0 328 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 OR6X1Q8NH79 312 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 M1APQ8TC57 530 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 GPR137Q96N19 417 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 SORCS2Q96PQ0 1159 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 DLL4Q9NR61 685 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 RYDENQ9NUL5 291 aaKnown RBP12.2□□□□□ -0.46
THBS3-202ENST00000428962 FAM206AQ9NX38 181 aa12.2□□□□□ -0.46
THBS3-202ENST00000428962 LOC390937A0A1W2PQ73 354 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 ZNF878C9JN71 531 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 TRAF3IP2O43734 574 aaPredicted RBP12.19□□□□□ -0.46
THBS3-202ENST00000428962 GTF2F2P13984 249 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 RAB6AP20340 208 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 DNASE1P24855 282 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 P2RY4P51582 365 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 RIPPLY1Q0D2K3 151 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 C1orf100Q5SVJ3 147 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 CORO6Q6QEF8 472 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 FAM198BQ6UWH4 519 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 NHLRC1Q6VVB1 395 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 RHOUQ7L0Q8 258 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 GPAT4Q86UL3 456 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 FAM109AQ8N4B1 249 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 SPICQ8N5J4 248 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 MEIOBQ8N635 442 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 WDSUB1Q8N9V3 476 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 OR4C16Q8NGL9 310 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 SLCO5A1Q9H2Y9 848 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 TMEM185BQ9H7F4 350 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 PTRH2Q9Y3E5 179 aaKnown RBP12.19□□□□□ -0.46
THBS3-202ENST00000428962 FREM3P0C091 2139 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 PI4KAP42356 2102 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 SDK1Q7Z5N4 2213 aa12.19□□□□□ -0.46
THBS3-202ENST00000428962 ASCC3Q8N3C0 2202 aaKnown RBP12.19□□□□□ -0.46
THBS3-202ENST00000428962 LOC102725191A0A1B0GVB3 256 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 UBE2QL1A1L167 161 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 AQP7P3A6NL99 342 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 P2RY10O00398 339 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 TLX3O43711 291 aaPredicted RBP12.18□□□□□ -0.46
THBS3-202ENST00000428962 KDM4BO94953 1096 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 LPLP06858 475 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 ZNF43P17038 809 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 HSD11B1P28845 292 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 RAD52P43351 418 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 MC2RQ01718 297 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 ZNF626Q68DY1 528 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 FAAP20Q6NZ36 180 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 SEZ6L2Q6UXD5 910 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 ELMOD2Q8IZ81 293 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 OR6N1Q8NGY5 312 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 RADILQ96JH8 1075 aa12.18□□□□□ -0.46
THBS3-202ENST00000428962 GINS4Q9BRT9 223 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms