RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 TEAD3Q99594 435 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 WACQ9BTA9 647 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 HEATR1Q9H583 2144 aaKnown RBP12.59□□□□□ -0.39
SGCE-204ENST00000428696 SMPD3Q9NY59 655 aaPredicted RBP12.59□□□□□ -0.39
SGCE-204ENST00000428696 CYB5R1Q9UHQ9 305 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 DUSP13Q9UII6 198 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 NDRG4Q9ULP0 352 aaKnown RBP12.59□□□□□ -0.39
SGCE-204ENST00000428696 F5H5K5 113 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 PRODHO43272 600 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 GPRIN2O60269 458 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 SELENOFO60613 162 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 ABHD16AO95870 558 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 DBHP09172 617 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 ATP6V1E1P36543 226 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 SERPINF1P36955 418 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 HCCSP53701 268 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 UCP2P55851 309 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 RAB35Q15286 201 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 SLC35D3Q5M8T2 416 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 SPATA46Q5T0L3 261 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 LINC01590Q5TEZ4 76 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 LCN1P1Q5VSP4 162 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 PAMR1Q6UXH9 720 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 MEPCEQ7L2J0 689 aaKnown RBP12.58□□□□□ -0.4
SGCE-204ENST00000428696 DPY19L4Q7Z388 723 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 OR1J1Q8NGS3 322 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 ABHD4Q8TB40 342 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 POM121L2Q96KW2 1035 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 VCXQ9H320 206 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 RNPEPL1Q9HAU8 725 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 FAM118AQ9NWS6 357 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 DNAJC27Q9NZQ0 273 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 KCNG2Q9UJ96 466 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 CMAHPQ9Y471 501 aa12.58□□□□□ -0.4
SGCE-204ENST00000428696 LOC100130705A0A1B0GUX0 176 aa12.57□□□□□ -0.4
SGCE-204ENST00000428696 SOD3P08294 240 aa12.57□□□□□ -0.4
SGCE-204ENST00000428696 TTKP33981 857 aa12.57□□□□□ -0.4
SGCE-204ENST00000428696 OR8J1Q8NGP2 316 aa12.57□□□□□ -0.4
SGCE-204ENST00000428696 PIGTQ969N2 578 aa12.57□□□□□ -0.4
SGCE-204ENST00000428696 MAP6Q96JE9 813 aa12.57□□□□□ -0.4
SGCE-204ENST00000428696 HRASLS5Q96KN8 279 aa12.57□□□□□ -0.4
SGCE-204ENST00000428696 C4orf45Q96LM5 186 aa12.57□□□□□ -0.4
SGCE-204ENST00000428696 SYT3Q9BQG1 590 aa12.57□□□□□ -0.4
SGCE-204ENST00000428696 COPS4Q9BT78 406 aa12.57□□□□□ -0.4
SGCE-204ENST00000428696 HDHD2Q9H0R4 259 aa12.57□□□□□ -0.4
SGCE-204ENST00000428696 AASSQ9UDR5 926 aa12.57□□□□□ -0.4
SGCE-204ENST00000428696 OR6C6A6NF89 314 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 SYNGR3O43761 229 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 PSKH1P11801 424 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 BMP4P12644 408 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 CD53P19397 219 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 ERVS71-1P61550 626 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 ADIPOQQ15848 244 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 OGFRL1Q5TC84 451 aaPredicted RBP12.56□□□□□ -0.4
SGCE-204ENST00000428696 ZNF544Q6NX49 715 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 UNQ6126/PRO20091Q6UXV3 157 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 SHFQ7M4L6 423 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.56□□□□□ -0.4
SGCE-204ENST00000428696 GID4Q8IVV7 300 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 NUP37Q8NFH4 326 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 SLAMF6Q96DU3 332 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 ATF6BQ99941 703 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 CXorf56Q9H5V9 222 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 ELOVL3Q9HB03 270 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 C8orf4Q9NR00 106 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 LAMP5Q9UJQ1 280 aa12.56□□□□□ -0.4
SGCE-204ENST00000428696 A0A1W2PPW3 197 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 CCDC182A6NF36 153 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 SLC22A31A6NKX4 558 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 SMPD2O60906 423 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 APOL3O95236 402 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 ATE1O95260 518 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 NGFP01138 241 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 COX5BP10606 129 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 SLC2A5P22732 501 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 HSD11B1P28845 292 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 CDKN1AP38936 164 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 WNT5AP41221 380 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 SLC6A9P48067 706 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 PRKXP51817 358 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 SELENOVP59797 346 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 RPS23P62266 143 aaKnown RBP12.55□□□□□ -0.4
SGCE-204ENST00000428696 EFNB1P98172 346 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 ECH1Q13011 328 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 ALKBH6Q3KRA9 238 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 AADACL4Q5VUY2 407 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 NXNL2Q5VZ03 156 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 RGS7BPQ6MZT1 257 aaPredicted RBP12.55□□□□□ -0.4
SGCE-204ENST00000428696 TIGD4Q8IY51 512 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 ZNF101Q8IZC7 436 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 DHRSXQ8N5I4 330 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 PACRGLQ8N7B6 248 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 TRUB1Q8WWH5 349 aaKnown RBP12.55□□□□□ -0.4
SGCE-204ENST00000428696 SPTSSAQ969W0 71 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 PERPQ96FX8 193 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 ZNF582Q96NG8 517 aaPredicted RBP12.55□□□□□ -0.4
SGCE-204ENST00000428696 CNN2Q99439 309 aaKnown RBP12.55□□□□□ -0.4
SGCE-204ENST00000428696 VRK1Q99986 396 aaPredicted RBP12.55□□□□□ -0.4
SGCE-204ENST00000428696 APOL4Q9BPW4 351 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 TTTY10Q9BZA0 68 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms