RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 PLEKHA8Q96JA3 519 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 POLR2J2Q9GZM3 115 aaKnown RBP15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 POLR2J3Q9H1A7 115 aaKnown RBP15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 MARCH7Q9H992 704 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 POLE4Q9NR33 117 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 TUBG2Q9NRH3 451 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 SGCEO43556 437 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 CYB5R3P00387 301 aaPredicted RBP15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 SCG5P05408 212 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 THRBP10828 461 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 CPT2P23786 658 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 GUCY1A3Q02108 690 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 SCRN3Q0VDG4 424 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 FAM205BPQ63HN1 556 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 OLFML2AQ68BL7 652 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 SLC27A4Q6P1M0 643 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 FIP1L1Q6UN15 594 aaKnown RBP15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 CCDC80Q76M96 950 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 OR10AD1Q8NGE0 317 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 NEIL1Q96FI4 390 aaPredicted RBP15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 TMEM165Q9HC07 324 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 MIOXQ9UGB7 285 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 BAG5Q9UL15 447 aa15.31■□□□□ 0.04
UPK3BP1-201ENST00000428678 A6NIZ1 184 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 SRRM5B3KS81 715 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 H7C1C5 153 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 M0QZ24 198 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 IFI30P13284 250 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 OR1E2P47887 323 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 RAP1BP61224 184 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 LCN6P62502 163 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 RAP1AP62834 184 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 OR8B3Q8NGG8 313 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 BPIFA2Q96DR5 249 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 MEGF10Q96KG7 1140 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 MAGEB18Q96M61 343 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 COG8Q96MW5 612 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 OR8B2Q96RD0 313 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 NUDT16L1Q9BRJ7 211 aaKnown RBP15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 TMEM246Q9BRR3 403 aa15.3■□□□□ 0.04
UPK3BP1-201ENST00000428678 IGHV3-64DA0A0J9YX35 117 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 KIR2DS1A0A191URI9 304 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 PITPNBP48739 271 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 FGF12P61328 243 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 GPR157Q5UAW9 335 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 VASH1Q7L8A9 365 aaPredicted RBP15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 NLRC3Q7RTR2 1065 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 MICU2Q8IYU8 434 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 SLC7A6Q92536 515 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 PTP4A1Q93096 173 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 DACT3Q96B18 629 aaPredicted RBP15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 PKP2Q99959 881 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 CITED1Q99966 193 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 WACQ9BTA9 647 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 CHIAQ9BZP6 476 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 MMP27Q9H306 513 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 TMBIM4Q9HC24 238 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 PTTG3PQ9NZH4 202 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 C1RLQ9NZP8 487 aa15.29■□□□□ 0.04
UPK3BP1-201ENST00000428678 TRAV27A0A087WT01 109 aa15.28■□□□□ 0.04
UPK3BP1-201ENST00000428678 TIMM23O14925 209 aa15.28■□□□□ 0.04
UPK3BP1-201ENST00000428678 RAC2P15153 192 aa15.28■□□□□ 0.04
UPK3BP1-201ENST00000428678 SRP9P49458 86 aaKnown RBP15.28■□□□□ 0.04
UPK3BP1-201ENST00000428678 GZMMP51124 257 aa15.28■□□□□ 0.04
UPK3BP1-201ENST00000428678 RELBQ01201 579 aa15.28■□□□□ 0.04
UPK3BP1-201ENST00000428678 HLXQ14774 488 aaPredicted RBP15.28■□□□□ 0.04
UPK3BP1-201ENST00000428678 MOGAT3Q86VF5 341 aa15.28■□□□□ 0.04
UPK3BP1-201ENST00000428678 LRRC75AQ8NAA5 344 aa15.28■□□□□ 0.04
UPK3BP1-201ENST00000428678 OR51A7Q8NH64 312 aa15.28■□□□□ 0.04
UPK3BP1-201ENST00000428678 UBE2FQ969M7 185 aa15.28■□□□□ 0.04
UPK3BP1-201ENST00000428678 PRDM13Q9H4Q3 707 aa15.28■□□□□ 0.04
UPK3BP1-201ENST00000428678 CLN8Q9UBY8 286 aa15.28■□□□□ 0.04
UPK3BP1-201ENST00000428678 CLPSL1A2RUU4 121 aa15.27■□□□□ 0.04
UPK3BP1-201ENST00000428678 LRRC30A6NM36 301 aa15.27■□□□□ 0.04
UPK3BP1-201ENST00000428678 NDUFA7O95182 113 aa15.27■□□□□ 0.04
UPK3BP1-201ENST00000428678 ZNF404Q494X3 552 aa15.27■□□□□ 0.04
UPK3BP1-201ENST00000428678 TTMPQ5BVD1 217 aa15.27■□□□□ 0.04
UPK3BP1-201ENST00000428678 FAM201AQ5SY85 155 aa15.27■□□□□ 0.04
UPK3BP1-201ENST00000428678 RUSC1-AS1Q66K80 236 aa15.27■□□□□ 0.04
UPK3BP1-201ENST00000428678 OR2T2Q6IF00 324 aa15.27■□□□□ 0.04
UPK3BP1-201ENST00000428678 C1orf87Q8N0U7 546 aa15.27■□□□□ 0.04
UPK3BP1-201ENST00000428678 FITM2Q8N6M3 262 aa15.27■□□□□ 0.04
UPK3BP1-201ENST00000428678 OR13G1Q8NGZ3 307 aa15.27■□□□□ 0.04
UPK3BP1-201ENST00000428678 NOX4Q9NPH5 578 aa15.27■□□□□ 0.04
UPK3BP1-201ENST00000428678 H0YL77 283 aa15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 ST3GAL3Q11203 375 aa15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 AQP6Q13520 282 aa15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 RABL3Q5HYI8 236 aa15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 OTPQ5XKR4 325 aa15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 Q6YL49 198 aa15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 RHOUQ7L0Q8 258 aa15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 OAFQ86UD1 273 aa15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 OR8G5Q8NG78 346 aa15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 ZNF582Q96NG8 517 aaPredicted RBP15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 SLC30A2Q9BRI3 323 aa15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 PCGF1Q9BSM1 259 aa15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 CDADC1Q9BWV3 514 aa15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 ARMCX1Q9P291 453 aa15.26■□□□□ 0.03
UPK3BP1-201ENST00000428678 HTR3EA5X5Y0 456 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 F5H5P2 479 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms