RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 ZNF75AQ96N20 296 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 YIPF3Q9GZM5 350 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 CENPMQ9NSP4 180 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 HAO2Q9NYQ3 351 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 EIF3KQ9UBQ5 218 aaKnown RBP13.14□□□□□ -0.31
VARS2-203ENST00000428017 AASSQ9UDR5 926 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 ATPIF1Q9UII2 106 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 LAMP5Q9UJQ1 280 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 TMEM14AQ9Y6G1 99 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 ATP23Q9Y6H3 246 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 OR6C6A6NF89 314 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 VSTM5A8MXK1 200 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 SYNGR3O43761 229 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 LYNP07948 512 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 GNAO1P09471 354 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 CCL2P13500 99 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 GABRB1P18505 474 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 SLC15A1P46059 708 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 NUDT6P53370 316 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 THAP5Q7Z6K1 395 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 SLC35F2Q8IXU6 374 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 OTOSQ8NHW6 89 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 SPTSSAQ969W0 71 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 SLAMF6Q96DU3 332 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 MAP6Q96JE9 813 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 MNTQ99583 582 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 COQ7Q99807 217 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 ATF6BQ99941 703 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 TMEM204Q9BSN7 226 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 COPS4Q9BT78 406 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 ABHD6Q9BV23 337 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 ADGRL4Q9HBW9 690 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 RPL36Q9Y3U8 105 aaKnown RBP13.13□□□□□ -0.31
VARS2-203ENST00000428017 COL12A1Q99715 3063 aa13.13□□□□□ -0.31
VARS2-203ENST00000428017 FAM221AA4D161 298 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 ZNF878C9JN71 531 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 PHYHO14832 338 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 SBK2P0C263 348 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 ZNF35P13682 527 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 LOXP28300 417 aaPredicted RBP13.12□□□□□ -0.31
VARS2-203ENST00000428017 CALCRP30988 508 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 ISL1P61371 349 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 KRT80Q6KB66 452 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 KCTD18Q6PI47 426 aaPredicted RBP13.12□□□□□ -0.31
VARS2-203ENST00000428017 SPATC1Q76KD6 591 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 CDC20BQ86Y33 519 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.12□□□□□ -0.31
VARS2-203ENST00000428017 CNIH3Q8TBE1 160 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 IPCEF1Q8WWN9 437 aaPredicted RBP13.12□□□□□ -0.31
VARS2-203ENST00000428017 ASB17Q8WXJ9 295 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 AKAP1Q92667 903 aaKnown RBP eCLIP13.12□□□□□ -0.31
VARS2-203ENST00000428017 POM121L2Q96KW2 1035 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 ZNF184Q99676 751 aaPredicted RBP13.12□□□□□ -0.31
VARS2-203ENST00000428017 Q9H521 79 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 UBTD1Q9HAC8 227 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 GRIP1Q9Y3R0 1128 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 PCDHGB1Q9Y5G3 927 aa13.12□□□□□ -0.31
VARS2-203ENST00000428017 LOC100509620A0A075B734 347 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 SHISA9B4DS77 424 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 ZNF670-ZNF695F2Z2N8 137 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 F5H5K5 113 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 APOL3O95236 402 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 ABHD16AO95870 558 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 PLAUP00749 431 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 H2BFMP0C1H6 154 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 DBTP11182 482 aaKnown RBP13.11□□□□□ -0.31
VARS2-203ENST00000428017 HSD11B1P28845 292 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 RAD52P43351 418 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 TPTEP56180 551 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 RPS23P62266 143 aaKnown RBP13.11□□□□□ -0.31
VARS2-203ENST00000428017 ACTC1P68032 377 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 ACTA1P68133 377 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 ZNF91Q05481 1191 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 SNTB2Q13425 540 aaKnown RBP13.11□□□□□ -0.31
VARS2-203ENST00000428017 ZNF672Q499Z4 452 aaPredicted RBP13.11□□□□□ -0.31
VARS2-203ENST00000428017 USP51Q70EK9 711 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 OR10H4Q8NGA5 316 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 ST7LQ8TDW4 575 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 SMAP2Q8WU79 429 aaPredicted RBP13.11□□□□□ -0.31
VARS2-203ENST00000428017 APH1BQ8WW43 257 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 DCLRE1CQ96SD1 692 aaKnown RBP13.11□□□□□ -0.31
VARS2-203ENST00000428017 ELOVL3Q9HB03 270 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 AMBNQ9NP70 447 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 CISD1Q9NZ45 108 aaKnown RBP13.11□□□□□ -0.31
VARS2-203ENST00000428017 RAB26Q9ULW5 256 aa13.11□□□□□ -0.31
VARS2-203ENST00000428017 IRGMA1A4Y4 181 aa13.1□□□□□ -0.31
VARS2-203ENST00000428017 HS3ST1O14792 307 aa13.1□□□□□ -0.31
VARS2-203ENST00000428017 WBP4O75554 376 aaKnown RBP13.1□□□□□ -0.31
VARS2-203ENST00000428017 FADS2O95864 444 aaKnown RBP13.1□□□□□ -0.31
VARS2-203ENST00000428017 LCKP06239 509 aa13.1□□□□□ -0.31
VARS2-203ENST00000428017 OR2T7P0C7T2 308 aa13.1□□□□□ -0.31
VARS2-203ENST00000428017 FAM157BP0CG42 384 aa13.1□□□□□ -0.31
VARS2-203ENST00000428017 PSKH1P11801 424 aa13.1□□□□□ -0.31
VARS2-203ENST00000428017 ALOX5APP20292 161 aa13.1□□□□□ -0.31
VARS2-203ENST00000428017 NR4A1P22736 598 aa13.1□□□□□ -0.31
VARS2-203ENST00000428017 PCSK6P29122 969 aa13.1□□□□□ -0.31
VARS2-203ENST00000428017 SLC6A9P48067 706 aa13.1□□□□□ -0.31
VARS2-203ENST00000428017 HCCSP53701 268 aa13.1□□□□□ -0.31
VARS2-203ENST00000428017 GRB2P62993 217 aaKnown RBP13.1□□□□□ -0.31
VARS2-203ENST00000428017 KLHL22Q53GT1 634 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms