RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 OR7C2O60412 319 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 ZNF252P-AS1Q0IIN9 211 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 FA2HQ7L5A8 372 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 DOK4Q8TEW6 326 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 SORBS1Q9BX66 1292 aaKnown RBP13.23□□□□□ -0.29
PTPN13-203ENST00000427191 FGF7P21781 194 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 DHRS4L2Q6PKH6 230 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 CHST8Q9H2A9 424 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 USP22Q9UPT9 525 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 HOXC5Q00444 222 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 ELAVL1Q15717 326 aaKnown RBP13.23□□□□□ -0.29
PTPN13-203ENST00000427191 TRNP1Q6NT89 227 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 WDR73Q6P4I2 378 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 CLRN3Q8NCR9 226 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 J3KTA2 159 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 NME2P1O60361 137 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 PTAFRP25105 342 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 CLDN12P56749 244 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 COTL1Q14019 142 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 SMIM21Q3B7S5 101 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 LEXMQ3ZCV2 418 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 NLRC3Q7RTR2 1065 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 PLPP7Q8NBV4 271 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 EDAQ92838 391 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 DVL3Q92997 716 aaPredicted RBP13.22□□□□□ -0.29
PTPN13-203ENST00000427191 ZDHHC5Q9C0B5 715 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 CSNK1G1Q9HCP0 422 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 AREGP15514 252 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 GABARAPL3Q9BY60 117 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 M0R143 59 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 CNMDO75829 334 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 FCGR2CP31995 323 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 VHLLQ6RSH7 139 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 OR2A1Q8NGT9 310 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 OR2T6Q8NHC8 308 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 ZNF596Q8TC21 504 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 TOLLIPQ9H0E2 274 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 STARD5Q9NSY2 213 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 A0A1B0GX78 115 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 BCAT2O15382 392 aaPredicted RBP13.22□□□□□ -0.29
PTPN13-203ENST00000427191 HLA-FP30511 346 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 CLEC14AQ86T13 490 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 SCCPDHQ8NBX0 429 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 C3orf30Q96M34 536 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 ELF4Q99607 663 aaPredicted RBP13.22□□□□□ -0.29
PTPN13-203ENST00000427191 UBE2ZQ9H832 354 aaPredicted RBP13.22□□□□□ -0.29
PTPN13-203ENST00000427191 TIMM9Q9Y5J7 89 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 AQP7O14520 342 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 GPX2P18283 190 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 APEX1P27695 318 aaKnown RBP13.22□□□□□ -0.29
PTPN13-203ENST00000427191 DLK2Q6UY11 383 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 C12orf57Q99622 126 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 LMAN1LQ9HAT1 526 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 TIAM2Q8IVF5 1701 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 ANKUB1A6NFN9 424 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 TEAD1P28347 426 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 OR5AP2Q8NGF4 316 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 DDOQ99489 341 aa13.22□□□□□ -0.29
PTPN13-203ENST00000427191 TERTO14746 1132 aaKnown RBP13.21□□□□□ -0.29
PTPN13-203ENST00000427191 SLCO2B1O94956 709 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 LRRTM1Q86UE6 522 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 MFSD4AQ8N468 514 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 OR10G3Q8NGC4 313 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 OLIG1Q8TAK6 271 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 ST8SIA1Q92185 356 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 SMIM19Q96E16 107 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 RP1P56715 2156 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 LAMB1P07942 1786 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 CD37P11049 281 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 CTBSQ01459 385 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 FABP9Q0Z7S8 132 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 SMN1Q16637 294 aaKnown RBP13.21□□□□□ -0.29
PTPN13-203ENST00000427191 HAGHQ16775 308 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 DTWD2Q8NBA8 298 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 OR5D18Q8NGL1 313 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 FAM166BA8MTA8 275 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 PIGAP37287 484 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 SLC39A5Q6ZMH5 540 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 FAM26EQ8N5C1 309 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 CELF2-AS1Q8N7Q2 184 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 TMEM102Q8N9M5 508 aaPredicted RBP13.21□□□□□ -0.29
PTPN13-203ENST00000427191 GPR119Q8TDV5 335 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 HLA-CQ95604 372 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 SLC35B4Q969S0 331 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 SERPINE3A8MV23 424 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 SCO1O75880 301 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 MFSD12Q6NUT3 480 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 TCTEX1D1Q8N7M0 179 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 NEIL1Q96FI4 390 aaPredicted RBP13.21□□□□□ -0.29
PTPN13-203ENST00000427191 LHX3Q9UBR4 397 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 BCL2L11O43521 198 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 SIGLEC6O43699 453 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 TMEM11P17152 192 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 PPP1CAP62136 330 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 OR2T2Q6IF00 324 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 SLCO4C1Q6ZQN7 724 aa13.21□□□□□ -0.29
PTPN13-203ENST00000427191 EIF4E3Q8N5X7 224 aaKnown RBP13.21□□□□□ -0.29
PTPN13-203ENST00000427191 COX7A2P2O60397 106 aa13.21□□□□□ -0.3
PTPN13-203ENST00000427191 NDUFB7P17568 137 aa13.21□□□□□ -0.3
PTPN13-203ENST00000427191 ZP3P21754 424 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms