RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 SYT9Q86SS6 491 aa12.22□□□□□ -0.45
PDAP1-202ENST00000426447 TSPYL5Q86VY4 417 aaPredicted RBP12.22□□□□□ -0.45
PDAP1-202ENST00000426447 C1orf87Q8N0U7 546 aa12.22□□□□□ -0.45
PDAP1-202ENST00000426447 FITM2Q8N6M3 262 aa12.22□□□□□ -0.45
PDAP1-202ENST00000426447 DACT3Q96B18 629 aaPredicted RBP12.22□□□□□ -0.45
PDAP1-202ENST00000426447 PRSS27Q9BQR3 290 aa12.22□□□□□ -0.45
PDAP1-202ENST00000426447 ALG12Q9BV10 488 aa12.22□□□□□ -0.45
PDAP1-202ENST00000426447 IGHV3-64DA0A0J9YX35 117 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 POLR3GO15318 223 aaPredicted RBP12.21□□□□□ -0.45
PDAP1-202ENST00000426447 ENSAO43768 121 aaKnown RBP12.21□□□□□ -0.45
PDAP1-202ENST00000426447 DOK2O60496 412 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 CLPXO76031 633 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 COX5BP10606 129 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 IRF2P14316 349 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 ENDOGQ14249 297 aaKnown RBP12.21□□□□□ -0.45
PDAP1-202ENST00000426447 ALG10Q5BKT4 473 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 PATL1Q86TB9 770 aaKnown RBP12.21□□□□□ -0.45
PDAP1-202ENST00000426447 MOGAT3Q86VF5 341 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 NKAIN4Q8IVV8 208 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 CLDN22Q8N7P3 220 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 OR10AD1Q8NGE0 317 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 OR13G1Q8NGZ3 307 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 TMEM255BQ8WV15 326 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 GATAD2BQ8WXI9 593 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 MEGF10Q96KG7 1140 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 C20orf141Q9NUB4 165 aa12.21□□□□□ -0.45
PDAP1-202ENST00000426447 CMYA5Q8N3K9 4069 aa12.21□□□□□ -0.46
PDAP1-202ENST00000426447 TRBV5-3A0A0A0MS03 114 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 TMEM120BA0PK00 339 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 NPIPB13A6NJU9 1138 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 NPIPB4C9JG80 1138 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 P2RY10O00398 339 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 TNFRSF13BO14836 293 aaPredicted RBP12.2□□□□□ -0.46
PDAP1-202ENST00000426447 GPR137BO60478 399 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 TOX4O94842 621 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 RAC2P15153 192 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 RBM34P42696 430 aaKnown RBP12.2□□□□□ -0.46
PDAP1-202ENST00000426447 ERFP50548 548 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 PROK1P58294 105 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 TAS2R41P59536 307 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 RPL27P61353 136 aaKnown RBP12.2□□□□□ -0.46
PDAP1-202ENST00000426447 SCRN3Q0VDG4 424 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 C2orf68Q2NKX9 166 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 ZNF404Q494X3 552 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 AGKQ53H12 422 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 WDR25Q64LD2 544 aaPredicted RBP12.2□□□□□ -0.46
PDAP1-202ENST00000426447 EPGNQ6UW88 154 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 TMEM239Q8WW34 195 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 ZNF582Q96NG8 517 aaPredicted RBP12.2□□□□□ -0.46
PDAP1-202ENST00000426447 CPPED1Q9BRF8 314 aaPredicted RBP12.2□□□□□ -0.46
PDAP1-202ENST00000426447 WACQ9BTA9 647 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 CDADC1Q9BWV3 514 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 TRIM15Q9C019 465 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 PCDHAC1Q9H158 963 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 EMC7Q9NPA0 242 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 ACOXLQ9NUZ1 547 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 SH3GLB1Q9Y371 365 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 USH1CQ9Y6N9 552 aa12.2□□□□□ -0.46
PDAP1-202ENST00000426447 C3orf80F5H4A9 247 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 PHYHO14832 338 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 SGCEO43556 437 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 SFTPBP07988 381 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 CSF1P09603 554 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 MRPL19P49406 292 aaKnown RBP12.19□□□□□ -0.46
PDAP1-202ENST00000426447 CTXN1P60606 82 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 TNFAIP8L3Q5GJ75 292 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 FAM201AQ5SY85 155 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 CD276Q5ZPR3 534 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 OR2T2Q6IF00 324 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 LYPD2Q6UXB3 125 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 MREGQ8N565 214 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 SCCPDHQ8NBX0 429 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 OR8G5Q8NG78 346 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 OR5L1Q8NGL2 311 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 RASSF5Q8WWW0 418 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 LIPHQ8WWY8 451 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 TECTBQ96PL2 329 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 POLE4Q9NR33 117 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 NKIRAS1Q9NYS0 192 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 RIMS3Q9UJD0 308 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 MED31Q9Y3C7 131 aa12.19□□□□□ -0.46
PDAP1-202ENST00000426447 CENPVL3A0A0U1RRI6 287 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 ZNF879B4DU55 563 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 H0YL77 283 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 IGF2P01344 180 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 IGHV4-59P01825 116 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 SCG5P05408 212 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 LIPFP07098 398 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 TSPAN19P0C672 248 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 CFHR2P36980 270 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 MTPNP58546 118 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 ZNF181Q2M3W8 571 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 INTS11Q5TA45 600 aaKnown RBP12.18□□□□□ -0.46
PDAP1-202ENST00000426447 DLEU7Q6UYE1 221 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 GDPGP1Q6ZNW5 385 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 DCDC5Q6ZRR9 648 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 FOXL2NBQ6ZUU3 175 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 SLC7A6Q92536 515 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 TAMM41Q96BW9 452 aa12.18□□□□□ -0.46
PDAP1-202ENST00000426447 PTTG3PQ9NZH4 202 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms