RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 KRT36O76013 467 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 TXNDC12O95881 172 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 RENP00797 406 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 TACSTD2P09758 323 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 ACHEP22303 614 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 CRABP1P29762 137 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 MPV17P39210 176 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 ZNF81P51508 661 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 PPP1CBP62140 327 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 CCL8P80075 99 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 CCNIQ14094 377 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 TSTQ16762 297 aaKnown RBP10.84□□□□□ -0.67
SGCE-203ENST00000425444 RFX4Q33E94 735 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 DHFR2Q86XF0 187 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 C1orf174Q8IYL3 243 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 OR9Q2Q8NGE9 314 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 CCDC124Q96CT7 223 aaKnown RBP10.84□□□□□ -0.67
SGCE-203ENST00000425444 C4orf45Q96LM5 186 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 SAMD8Q96LT4 415 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 NARFLQ9H6Q4 476 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 ZNF275Q9NSD4 429 aaPredicted RBP10.84□□□□□ -0.67
SGCE-203ENST00000425444 DECR2Q9NUI1 292 aa10.84□□□□□ -0.67
SGCE-203ENST00000425444 PPIHO43447 177 aaKnown RBP10.83□□□□□ -0.68
SGCE-203ENST00000425444 SPRY3O43610 288 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 TIMM8AO60220 97 aaPredicted RBP10.83□□□□□ -0.68
SGCE-203ENST00000425444 CDC14BO60729 498 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 LILRA1O75019 489 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 RGS9O75916 674 aaPredicted RBP10.83□□□□□ -0.68
SGCE-203ENST00000425444 MPZL1O95297 269 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 IGHV3-13P01766 116 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 COX5BP10606 129 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 GSTM3P21266 225 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 COL8A2P25067 703 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 IL2RGP31785 369 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 CDKN2AP42771 156 aaKnown RBP10.83□□□□□ -0.68
SGCE-203ENST00000425444 LSM6P62312 80 aaKnown RBP10.83□□□□□ -0.68
SGCE-203ENST00000425444 TSPAN31Q12999 210 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 FAM98BQ52LJ0 330 aaKnown RBP10.83□□□□□ -0.68
SGCE-203ENST00000425444 MBNL2Q5VZF2 373 aaKnown RBP10.83□□□□□ -0.68
SGCE-203ENST00000425444 LCN8Q6JVE9 175 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 C1orf94Q6P1W5 598 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 PGBD2Q6P3X8 592 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 PGM2L1Q6PCE3 622 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 TREML4Q6UXN2 200 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 ZNF620Q6ZNG0 422 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 RINLQ6ZS11 566 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 VASH1Q7L8A9 365 aaPredicted RBP10.83□□□□□ -0.68
SGCE-203ENST00000425444 OR52L1Q8NGH7 329 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 OR4K13Q8NH42 304 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 KLF14Q8TD94 323 aaPredicted RBP10.83□□□□□ -0.68
SGCE-203ENST00000425444 GTF3AQ92664 365 aaKnown RBP10.83□□□□□ -0.68
SGCE-203ENST00000425444 HPS1Q92902 700 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 YIPF5Q969M3 257 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 MARS2Q96GW9 593 aaKnown RBP10.83□□□□□ -0.68
SGCE-203ENST00000425444 LRGUKQ96M69 825 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 TSSK2Q96PF2 358 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 NMNAT3Q96T66 252 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 SOX7Q9BT81 388 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 MAGIXQ9H6Y5 334 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 SAP30LQ9HAJ7 183 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 SRA1Q9HD15 236 aaKnown RBP10.83□□□□□ -0.68
SGCE-203ENST00000425444 PRPF19Q9UMS4 504 aaKnown RBP10.83□□□□□ -0.68
SGCE-203ENST00000425444 GRIP1Q9Y3R0 1128 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 LYVE1Q9Y5Y7 322 aa10.83□□□□□ -0.68
SGCE-203ENST00000425444 IGHV1-69-2A0A0G2JMI3 117 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 TCRBV5S2A0A599 114 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 H3BSA7 217 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 ARPC3O15145 178 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 CCNB2O95067 398 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 GPANK1O95872 356 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 NGFP01138 241 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 HIST1H1CP16403 213 aaKnown RBP10.82□□□□□ -0.68
SGCE-203ENST00000425444 GSSP48637 474 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 TMEM33P57088 247 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 MRPS11P82912 194 aaKnown RBP10.82□□□□□ -0.68
SGCE-203ENST00000425444 TEKQ02763 1124 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 TRIM25Q14258 630 aaKnown RBP10.82□□□□□ -0.68
SGCE-203ENST00000425444 MEP1BQ16820 701 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 ZMAT1Q5H9K5 638 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 CLEC12AQ5QGZ9 265 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 RPL13AP3Q6NVV1 102 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 LINC00471Q8N535 108 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 LINC01356Q8N9X3 169 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 NPEPL1Q8NDH3 523 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 SDR9C7Q8NEX9 313 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 FAM216AQ8WUB2 273 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 EGLN3Q9H6Z9 239 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 METTL17Q9H7H0 456 aaPredicted RBP10.82□□□□□ -0.68
SGCE-203ENST00000425444 REEP1Q9H902 201 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 RPRD1BQ9NQG5 326 aaKnown RBP10.82□□□□□ -0.68
SGCE-203ENST00000425444 CYSLTR2Q9NS75 346 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 NKIRAS2Q9NYR9 191 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 CGGBP1Q9UFW8 167 aaPredicted RBP10.82□□□□□ -0.68
SGCE-203ENST00000425444 PCDHGB1Q9Y5G3 927 aa10.82□□□□□ -0.68
SGCE-203ENST00000425444 IGLV1-36A0A0B4J1U3 117 aa10.81□□□□□ -0.68
SGCE-203ENST00000425444 DCTN6O00399 190 aa10.81□□□□□ -0.68
SGCE-203ENST00000425444 RER1O15258 196 aa10.81□□□□□ -0.68
SGCE-203ENST00000425444 ICMTO60725 284 aa10.81□□□□□ -0.68
SGCE-203ENST00000425444 RP2O75695 350 aa10.81□□□□□ -0.68
SGCE-203ENST00000425444 HLA-DQA2P01906 255 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms