RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 PPIAP62937 165 aaKnown RBP23.43■■□□□ 1.34
LDB1-202ENST00000425280 RTP5Q14D33 572 aa23.43■■□□□ 1.34
LDB1-202ENST00000425280 FCRLAQ7L513 359 aa23.43■■□□□ 1.34
LDB1-202ENST00000425280 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.43■■□□□ 1.34
LDB1-202ENST00000425280 ZFP62Q8NB50 900 aaPredicted RBP23.43■■□□□ 1.34
LDB1-202ENST00000425280 ZNF416Q9BWM5 594 aa23.43■■□□□ 1.34
LDB1-202ENST00000425280 ULBP2Q9BZM5 246 aa23.43■■□□□ 1.34
LDB1-202ENST00000425280 TBCCD1Q9NVR7 557 aa23.43■■□□□ 1.34
LDB1-202ENST00000425280 ARPC4-TTLL3A0A0A6YYG9 625 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 A0A1W2PQ09 198 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 ZNF878C9JN71 531 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 AIPO00170 330 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 RER1O15258 196 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 MSR1P21757 451 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 SRYQ05066 204 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 RIN1Q13671 783 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 ZNF766Q5HY98 468 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 HES5Q5TA89 166 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 OR4M1Q8NGD0 313 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 NABP1Q96AH0 204 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 NELFAQ9H3P2 528 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 PNRC2Q9NPJ4 139 aaKnown RBP23.42■■□□□ 1.34
LDB1-202ENST00000425280 DOK2O60496 412 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 PTTG1O95997 202 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 ZNF708P17019 499 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 GUCA1AP43080 201 aaPredicted RBP23.42■■□□□ 1.34
LDB1-202ENST00000425280 CLN3Q13286 438 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 BCL2L15Q5TBC7 163 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 KLHL24Q6TFL4 600 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 RHOUQ7L0Q8 258 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 RBM24Q9BX46 236 aaKnown RBP23.42■■□□□ 1.34
LDB1-202ENST00000425280 DHDHQ9UQ10 334 aa23.42■■□□□ 1.34
LDB1-202ENST00000425280 ITGB2P05107 769 aa23.41■■□□□ 1.34
LDB1-202ENST00000425280 ISG15P05161 165 aa23.41■■□□□ 1.34
LDB1-202ENST00000425280 ZNF704Q6ZNC4 412 aaPredicted RBP23.41■■□□□ 1.34
LDB1-202ENST00000425280 ABHD3Q8WU67 409 aa23.41■■□□□ 1.34
LDB1-202ENST00000425280 ASB5Q8WWX0 329 aa23.41■■□□□ 1.34
LDB1-202ENST00000425280 SPATA2Q9UM82 520 aa23.41■■□□□ 1.34
LDB1-202ENST00000425280 SLC43A1O75387 559 aa23.4■■□□□ 1.34
LDB1-202ENST00000425280 CDC20Q12834 499 aa23.4■■□□□ 1.34
LDB1-202ENST00000425280 AAED1Q7RTV5 226 aa23.4■■□□□ 1.34
LDB1-202ENST00000425280 FDCSPQ8NFU4 85 aa23.4■■□□□ 1.34
LDB1-202ENST00000425280 ZNF837Q96EG3 531 aaPredicted RBP23.4■■□□□ 1.34
LDB1-202ENST00000425280 LOC107986453A0A1B0GWG9 222 aa23.4■■□□□ 1.34
LDB1-202ENST00000425280 MAS1P04201 325 aa23.4■■□□□ 1.34
LDB1-202ENST00000425280 ACHEP22303 614 aa23.4■■□□□ 1.34
LDB1-202ENST00000425280 TALDO1P37837 337 aa23.4■■□□□ 1.34
LDB1-202ENST00000425280 ENDOGQ14249 297 aaKnown RBP23.4■■□□□ 1.34
LDB1-202ENST00000425280 ZNF671Q8TAW3 534 aa23.4■■□□□ 1.34
LDB1-202ENST00000425280 SETD6Q8TBK2 473 aa23.4■■□□□ 1.34
LDB1-202ENST00000425280 LGALS14Q8TCE9 139 aa23.4■■□□□ 1.34
LDB1-202ENST00000425280 HHLA2Q9UM44 414 aa23.4■■□□□ 1.34
LDB1-202ENST00000425280 GVINP1Q7Z2Y8 2422 aa23.39■■□□□ 1.34
LDB1-202ENST00000425280 PFDN1O60925 122 aa23.39■■□□□ 1.34
LDB1-202ENST00000425280 APOA1P02647 267 aa23.39■■□□□ 1.34
LDB1-202ENST00000425280 SPNP16150 400 aa23.39■■□□□ 1.34
LDB1-202ENST00000425280 TNFSF10P50591 281 aa23.39■■□□□ 1.34
LDB1-202ENST00000425280 ZNF84P51523 738 aa23.39■■□□□ 1.34
LDB1-202ENST00000425280 ASPHD2Q6ICH7 369 aa23.39■■□□□ 1.34
LDB1-202ENST00000425280 GDPD3Q7L5L3 318 aa23.39■■□□□ 1.34
LDB1-202ENST00000425280 Q8N402 240 aa23.39■■□□□ 1.34
LDB1-202ENST00000425280 DTX3Q8N9I9 347 aa23.39■■□□□ 1.34
LDB1-202ENST00000425280 DNAAF1Q8NEP3 725 aa23.39■■□□□ 1.34
LDB1-202ENST00000425280 CSAG2Q9Y5P2 127 aa23.39■■□□□ 1.34
LDB1-202ENST00000425280 A0A0G2JMP0 313 aa23.39■■□□□ 1.33
LDB1-202ENST00000425280 A0A0X1KG70 313 aa23.39■■□□□ 1.33
LDB1-202ENST00000425280 A0A1B0GVC2 190 aa23.39■■□□□ 1.33
LDB1-202ENST00000425280 A6NIN4 97 aa23.39■■□□□ 1.33
LDB1-202ENST00000425280 TMEM127O75204 238 aa23.39■■□□□ 1.33
LDB1-202ENST00000425280 UBCP0CG48 685 aaKnown RBP23.39■■□□□ 1.33
LDB1-202ENST00000425280 SCN1BQ07699 218 aa23.39■■□□□ 1.33
LDB1-202ENST00000425280 MEIOBQ8N635 442 aa23.39■■□□□ 1.33
LDB1-202ENST00000425280 TMEM178AQ8NBL3 297 aa23.39■■□□□ 1.33
LDB1-202ENST00000425280 OR4M2Q8NGB6 313 aa23.39■■□□□ 1.33
LDB1-202ENST00000425280 PBOV1Q9GZY1 135 aa23.39■■□□□ 1.33
LDB1-202ENST00000425280 NIPAL2Q9H841 368 aa23.39■■□□□ 1.33
LDB1-202ENST00000425280 ACKR4Q9NPB9 350 aa23.39■■□□□ 1.33
LDB1-202ENST00000425280 CLEC4AQ9UMR7 237 aa23.39■■□□□ 1.33
LDB1-202ENST00000425280 ANXA2P2A6NMY6 339 aa23.38■■□□□ 1.33
LDB1-202ENST00000425280 P2RY10O00398 339 aa23.38■■□□□ 1.33
LDB1-202ENST00000425280 ANXA2P07355 339 aaKnown RBP23.38■■□□□ 1.33
LDB1-202ENST00000425280 HSD11B1P28845 292 aa23.38■■□□□ 1.33
LDB1-202ENST00000425280 SLC10A1Q14973 349 aa23.38■■□□□ 1.33
LDB1-202ENST00000425280 TAF13Q15543 124 aa23.38■■□□□ 1.33
LDB1-202ENST00000425280 TAB1Q15750 504 aa23.38■■□□□ 1.33
LDB1-202ENST00000425280 TMEM244Q5VVB8 128 aa23.38■■□□□ 1.33
LDB1-202ENST00000425280 ELMOD2Q8IZ81 293 aa23.38■■□□□ 1.33
LDB1-202ENST00000425280 FAM109AQ8N4B1 249 aa23.38■■□□□ 1.33
LDB1-202ENST00000425280 KCNJ15Q99712 375 aa23.38■■□□□ 1.33
LDB1-202ENST00000425280 PCDHGA9Q9Y5G4 932 aaKnown RBP23.38■■□□□ 1.33
LDB1-202ENST00000425280 LIPGQ9Y5X9 500 aa23.38■■□□□ 1.33
LDB1-202ENST00000425280 TTRP02766 147 aa23.37■■□□□ 1.33
LDB1-202ENST00000425280 PSMA6P60900 246 aaKnown RBP23.37■■□□□ 1.33
LDB1-202ENST00000425280 OR13C3Q8NGS6 347 aa23.37■■□□□ 1.33
LDB1-202ENST00000425280 CELSR3Q9NYQ7 3312 aa23.37■■□□□ 1.33
LDB1-202ENST00000425280 FUOMA2VDF0 154 aa23.37■■□□□ 1.33
LDB1-202ENST00000425280 CLDN12P56749 244 aa23.37■■□□□ 1.33
LDB1-202ENST00000425280 MRPS34P82930 218 aaKnown RBP23.37■■□□□ 1.33
LDB1-202ENST00000425280 BCL2A1Q16548 175 aa23.37■■□□□ 1.33
LDB1-202ENST00000425280 RNFT1Q5M7Z0 435 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms