RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PPDPFQ9H3Y8 114 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 UBE2ZQ9H832 354 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 TMEM27Q9HBJ8 222 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 THUMPD1Q9NXG2 353 aaKnown RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 SLC25A37Q9NYZ2 338 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 RSPH14Q9UHP6 348 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 BTNL2Q9UIR0 455 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 GINS2Q9Y248 185 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 FARSAQ9Y285 508 aaKnown RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 MTUS2Q5JR59 1369 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 ABCC11Q96J66 1382 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 IGKV2D-30A0A075B6S6 120 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 SMIM28A0A1B0GU29 152 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 SRRM3A6NNA2 597 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-205ENST00000424674 EFCAB9A8MZ26 197 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 E9PAM4 449 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 NEDD8-MDP1E9PL57 170 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 J3QLI3 93 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 PSMD12O00232 456 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-205ENST00000424674 KPNA3O00505 521 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-205ENST00000424674 ATP6V0E1O15342 81 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 FABP7O15540 132 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 PHF1O43189 567 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-205ENST00000424674 SYNGR1O43759 233 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 UGT1A9O60656 530 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 CTNSO60931 367 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 DUSP11O75319 330 aaKnown RBP3.1□□□□□ -1.91
SF3B1-205ENST00000424674 OR2B3O76000 313 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 HOXD4P09016 255 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-205ENST00000424674 SLC2A1P11166 492 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 RPA3P35244 121 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-205ENST00000424674 GABRA4P48169 554 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 AMTP48728 403 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 ACOT2P49753 483 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 PPOXP50336 477 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 ATP4BP51164 291 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 HCCSP53701 268 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 PAFAH1B2P68402 229 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 BCL2L1Q07817 233 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 SLC39A6Q13433 755 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 TMEM187Q14656 261 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 TAF1AQ15573 450 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-205ENST00000424674 CCDC6Q16204 474 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 MAPK14Q16539 360 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 CALCRLQ16602 461 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 TMEM52BQ4KMG9 183 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 OR10J3Q5JRS4 329 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 IRAK1BP1Q5VVH5 260 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 SAXO2Q658L1 398 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 MED27Q6P2C8 311 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 FAM199XQ6PEV8 388 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-205ENST00000424674 WDR82Q6UXN9 313 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 STOX1Q6ZVD7 989 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 PHF13Q86YI8 300 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-205ENST00000424674 SLC22A15Q8IZD6 547 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 PRELID2Q8N945 189 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 MDS2Q8NDY4 140 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 OR2G2Q8NGZ5 317 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 OR10J5Q8NHC4 309 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 C16orf78Q8WTQ4 265 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 RASSF5Q8WWW0 418 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 OR5P2Q8WZ92 322 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 RAB8BQ92930 207 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 NTNG2Q96CW9 530 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 ADTRPQ96IZ2 230 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 C17orf77Q96MU5 243 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 OXGR1Q96P68 337 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 RBP7Q96R05 134 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 TBX15Q96SF7 602 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 FAM173AQ9BQD7 235 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 AGMATQ9BSE5 352 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 HES7Q9BYE0 225 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 NXF2Q9GZY0 626 aaKnown RBP3.1□□□□□ -1.91
SF3B1-205ENST00000424674 PCBD2Q9H0N5 130 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 TLNRD1Q9H1K6 362 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 ESM1Q9NQ30 184 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 CTPS2Q9NRF8 586 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 SEC14L4Q9UDX3 406 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 SMPXQ9UHP9 88 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 GOLT1BQ9Y3E0 138 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 CNTNAP1P78357 1384 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 ZFYVE9O95405 1425 aa3.1□□□□□ -1.91
SF3B1-205ENST00000424674 COL22A1Q8NFW1 1626 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-205ENST00000424674 KIR2DL5BA0A0G2JN68 375 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 KIR2DL5BA0A0G2JPC4 375 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF816-ZNF321PA0A0X1KG74 233 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 A0A1B0GW55 424 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 RPS10-NUDT3A0A1W2PQS6 291 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF233A6NK53 670 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 F5H5T6 163 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 GFYI3L273 518 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 CXCR6O00574 342 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 FCN1O00602 326 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ACOT8O14734 319 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 CDIPTO14735 213 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 SURF4O15260 269 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 BIRC5O15392 142 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ERI3O43414 337 aaKnown RBP3.09□□□□□ -1.91
SF3B1-205ENST00000424674 TOMM40O96008 361 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 IFNA21P01568 189 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms