RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 MEGF10Q96KG7 1140 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 COG8Q96MW5 612 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 RBP7Q96R05 134 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 ALG12Q9BV10 488 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 C16orf95Q9H693 158 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 CLN8Q9UBY8 286 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 STARD10Q9Y365 291 aa13.91□□□□□ -0.18
CHCHD3-202ENST00000423635 CENPVL3A0A0U1RRI6 287 aa13.9□□□□□ -0.18
CHCHD3-202ENST00000423635 EVPLLA8MZ36 301 aa13.9□□□□□ -0.18
CHCHD3-202ENST00000423635 P2RY10O00398 339 aa13.9□□□□□ -0.18
CHCHD3-202ENST00000423635 PHYHO14832 338 aa13.9□□□□□ -0.18
CHCHD3-202ENST00000423635 GPR137BO60478 399 aa13.9□□□□□ -0.18
CHCHD3-202ENST00000423635 VIMP08670 466 aaKnown RBP13.9□□□□□ -0.18
CHCHD3-202ENST00000423635 GUCA1AP43080 201 aaPredicted RBP13.9□□□□□ -0.18
CHCHD3-202ENST00000423635 VSNL1P62760 191 aa13.9□□□□□ -0.18
CHCHD3-202ENST00000423635 LAPTM4AQ15012 233 aa13.9□□□□□ -0.18
CHCHD3-202ENST00000423635 ATG16L2Q8NAA4 619 aa13.9□□□□□ -0.18
CHCHD3-202ENST00000423635 CDADC1Q9BWV3 514 aa13.9□□□□□ -0.18
CHCHD3-202ENST00000423635 C12orf71A8MTZ7 269 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 C3orf80F5H4A9 247 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 G3V4G9 280 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 H0YL77 283 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 ENSAO43768 121 aaKnown RBP13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 OPN1SWP03999 348 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 LIPFP07098 398 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 MMP9P14780 707 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 RAC2P15153 192 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 CFHR2P36980 270 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 IER3P46695 156 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 ERFP50548 548 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 WDR4P57081 412 aaKnown RBP13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 GUCY1A3Q02108 690 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 Q6ZSV7 163 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 REC114Q7Z4M0 266 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 SLC30A8Q8IWU4 369 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 C11orf65Q8NCR3 313 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 GATAD2BQ8WXI9 593 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 SPDL1Q96EA4 605 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 SGTBQ96EQ0 304 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 PCGF1Q9BSM1 259 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 C20orf141Q9NUB4 165 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 ACOXLQ9NUZ1 547 aa13.9□□□□□ -0.19
CHCHD3-202ENST00000423635 ZNF879B4DU55 563 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 C22orf46C9J442 243 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 PIN1P1O15428 100 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 SCG5P05408 212 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 CD247P20963 164 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 MSR1P21757 451 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 PSMB10P40306 273 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 RBM34P42696 430 aaKnown RBP13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 SRP9P49458 86 aaKnown RBP13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 RUNDC3AQ59EK9 446 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 SAMD5Q5TGI4 173 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 LYPD2Q6UXB3 125 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 DCDC5Q6ZRR9 648 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 LDLRAD3Q86YD5 345 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 C1orf87Q8N0U7 546 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 CLDN22Q8N7P3 220 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 OR8G5Q8NG78 346 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 OR13G1Q8NGZ3 307 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 PFN4Q8NHR9 129 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 TBX15Q96SF7 602 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 TRIM15Q9C019 465 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 KIF17Q9P2E2 1029 aa13.89□□□□□ -0.19
CHCHD3-202ENST00000423635 LRRC30A6NM36 301 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 J3QW42 95 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 IGHV4-59P01825 116 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 SFTPBP07988 381 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 CSF1P09603 554 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 PMELP40967 661 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 NPY4RP50391 375 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 RPL27P61353 136 aaKnown RBP13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 FAM201AQ5SY85 155 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 EPGNQ6UW88 154 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 DLEU7Q6UYE1 221 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 GDPGP1Q6ZNW5 385 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 NKAIN4Q8IVV8 208 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 PCYOX1LQ8NBM8 494 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 CPPED1Q9BRF8 314 aaPredicted RBP13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 POLE4Q9NR33 117 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 HIF3AQ9Y2N7 669 aa13.88□□□□□ -0.19
CHCHD3-202ENST00000423635 TSPAN9O75954 239 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 TOX4O94842 621 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 HTR5AP47898 357 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 STX1BP61266 288 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 SCRN3Q0VDG4 424 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 ALG10Q5BKT4 473 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 CD276Q5ZPR3 534 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 FBXW12Q6X9E4 464 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 VASH1Q7L8A9 365 aaPredicted RBP13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 PATL1Q86TB9 770 aaKnown RBP13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 MOGAT3Q86VF5 341 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 OR5AS1Q8N127 324 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 MREGQ8N565 214 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 OR10AD1Q8NGE0 317 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 TMEM255BQ8WV15 326 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 TMEM239Q8WW34 195 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 CCDC167Q9P0B6 97 aa13.87□□□□□ -0.19
CHCHD3-202ENST00000423635 IGHV1-69DA0A0B4J2H0 117 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 A0A1B0GWJ7 208 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms