RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 ZNF718Q3SXZ3 478 aa22.6■■□□□ 1.21
CDK9-202ENST00000421939 SLC36A3Q495N2 470 aa22.6■■□□□ 1.21
CDK9-202ENST00000421939 CCDC92Q53HC0 331 aaPredicted RBP22.6■■□□□ 1.21
CDK9-202ENST00000421939 SLC37A3Q8NCC5 494 aa22.6■■□□□ 1.21
CDK9-202ENST00000421939 OR2T4Q8NH00 348 aa22.6■■□□□ 1.21
CDK9-202ENST00000421939 OR1F12Q8NHA8 337 aa22.6■■□□□ 1.21
CDK9-202ENST00000421939 SLC25A40Q8TBP6 338 aa22.6■■□□□ 1.21
CDK9-202ENST00000421939 TEX47Q8TBZ9 253 aa22.6■■□□□ 1.21
CDK9-202ENST00000421939 DDOQ99489 341 aa22.6■■□□□ 1.21
CDK9-202ENST00000421939 OR2J1Q9GZK6 312 aa22.6■■□□□ 1.21
CDK9-202ENST00000421939 MMADHCQ9H3L0 296 aaPredicted RBP22.6■■□□□ 1.21
CDK9-202ENST00000421939 KLHL21Q9UJP4 597 aa22.6■■□□□ 1.21
CDK9-202ENST00000421939 CHD3Q12873 2000 aaKnown RBP22.6■■□□□ 1.21
CDK9-202ENST00000421939 FN1P02751 2386 aaKnown RBP22.6■■□□□ 1.21
CDK9-202ENST00000421939 ABCA1O95477 2261 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 H3BSA7 217 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 NGFP01138 241 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 IGHV3-13P01766 116 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 GCH1P30793 250 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 NR4A2P43354 598 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 HIST1H3AP68431 136 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 MOGQ16653 247 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 ZNF362Q5T0B9 420 aaPredicted RBP22.59■■□□□ 1.21
CDK9-202ENST00000421939 HIST2H3PS2Q5TEC6 136 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 HIST2H3AQ71DI3 136 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 PROKR2Q8NFJ6 384 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 GJC3Q8NFK1 279 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 UBASH3BQ8TF42 649 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 IPCEF1Q8WWN9 437 aaPredicted RBP22.59■■□□□ 1.21
CDK9-202ENST00000421939 HDHD2Q9H0R4 259 aa22.59■■□□□ 1.21
CDK9-202ENST00000421939 HINT3Q9NQE9 182 aaKnown RBP22.59■■□□□ 1.21
CDK9-202ENST00000421939 NAV3Q8IVL0 2385 aa22.58■■□□□ 1.21
CDK9-202ENST00000421939 HLA-DQA2P01906 255 aa22.58■■□□□ 1.21
CDK9-202ENST00000421939 USF1P22415 310 aaPredicted RBP22.58■■□□□ 1.21
CDK9-202ENST00000421939 PYCR1P32322 319 aa22.58■■□□□ 1.21
CDK9-202ENST00000421939 MPV17P39210 176 aa22.58■■□□□ 1.21
CDK9-202ENST00000421939 CRMP1Q14194 572 aa22.58■■□□□ 1.21
CDK9-202ENST00000421939 MBNL2Q5VZF2 373 aaKnown RBP22.58■■□□□ 1.21
CDK9-202ENST00000421939 CORO6Q6QEF8 472 aa22.58■■□□□ 1.21
CDK9-202ENST00000421939 HS3ST5Q8IZT8 346 aa22.58■■□□□ 1.21
CDK9-202ENST00000421939 ZNF786Q8N393 782 aa22.58■■□□□ 1.21
CDK9-202ENST00000421939 KLF14Q8TD94 323 aaPredicted RBP22.58■■□□□ 1.21
CDK9-202ENST00000421939 SLC7A6Q92536 515 aa22.58■■□□□ 1.21
CDK9-202ENST00000421939 TBCCD1Q9NVR7 557 aa22.58■■□□□ 1.21
CDK9-202ENST00000421939 H3BN98 237 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 IFNGP01579 166 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 MT-ND5P03915 603 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 C1orf146Q5VVC0 180 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 SLC18B1Q6NT16 456 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 TMEM154Q6P9G4 183 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 LINC00346Q8IVM7 164 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 ZNF540Q8NDQ6 660 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 OR9Q1Q8NGQ5 310 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 COQ7Q99807 217 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 RBM4Q9BWF3 364 aaKnown RBP22.57■■□□□ 1.2
CDK9-202ENST00000421939 BPESC1Q9GZL8 116 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 ZNF556Q9HAH1 456 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 MRPL22Q9NWU5 206 aaKnown RBP22.57■■□□□ 1.2
CDK9-202ENST00000421939 KCNG2Q9UJ96 466 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 GRIP1Q9Y3R0 1128 aa22.57■■□□□ 1.2
CDK9-202ENST00000421939 RIIAD1A6NNX1 92 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 C17orf100A8MU93 164 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 DEAF1O75398 565 aaPredicted RBP22.56■■□□□ 1.2
CDK9-202ENST00000421939 TIPRLO75663 272 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 NCR1O76036 304 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 ZNF3P17036 446 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 GIFP27352 417 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 GGT2P36268 569 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 GGTLC2Q14390 218 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 TMEM249Q2WGJ8 235 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 TMEM255AQ5JRV8 349 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 ELFN2Q5R3F8 820 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 CFAP77Q6ZQR2 320 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 IQCF1Q8N6M8 205 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 CYB5R1Q9UHQ9 305 aa22.56■■□□□ 1.2
CDK9-202ENST00000421939 HPXP02790 462 aa22.55■■□□□ 1.2
CDK9-202ENST00000421939 DBHP09172 617 aa22.55■■□□□ 1.2
CDK9-202ENST00000421939 GRK5P34947 590 aa22.55■■□□□ 1.2
CDK9-202ENST00000421939 SLC25A1P53007 311 aa22.55■■□□□ 1.2
CDK9-202ENST00000421939 PCGF3Q3KNV8 242 aa22.55■■□□□ 1.2
CDK9-202ENST00000421939 OR51L1Q8NGJ5 315 aa22.55■■□□□ 1.2
CDK9-202ENST00000421939 OR2AJ1Q8NGZ0 328 aa22.55■■□□□ 1.2
CDK9-202ENST00000421939 GTF3AQ92664 365 aaKnown RBP22.55■■□□□ 1.2
CDK9-202ENST00000421939 DCLRE1CQ96SD1 692 aaKnown RBP22.55■■□□□ 1.2
CDK9-202ENST00000421939 CDADC1Q9BWV3 514 aa22.55■■□□□ 1.2
CDK9-202ENST00000421939 CMC2Q9NRP2 79 aa22.55■■□□□ 1.2
CDK9-202ENST00000421939 LYNX1G3V0Z9 82 aa22.54■■□□□ 1.2
CDK9-202ENST00000421939 CD5LO43866 347 aa22.54■■□□□ 1.2
CDK9-202ENST00000421939 LYNX1P0DP58 116 aa22.54■■□□□ 1.2
CDK9-202ENST00000421939 ANXA8P13928 327 aa22.54■■□□□ 1.2
CDK9-202ENST00000421939 ZNF823P16415 610 aa22.54■■□□□ 1.2
CDK9-202ENST00000421939 TUBG1P23258 451 aa22.54■■□□□ 1.2
CDK9-202ENST00000421939 MAGEB1P43366 347 aa22.54■■□□□ 1.2
CDK9-202ENST00000421939 SHQ1Q6PI26 577 aaKnown RBP22.54■■□□□ 1.2
CDK9-202ENST00000421939 ATG16L2Q8NAA4 619 aa22.54■■□□□ 1.2
CDK9-202ENST00000421939 ZNRF4Q8WWF5 429 aa22.54■■□□□ 1.2
CDK9-202ENST00000421939 UTP4Q969X6 686 aaKnown RBP22.54■■□□□ 1.2
CDK9-202ENST00000421939 NMNAT2Q9BZQ4 307 aa22.54■■□□□ 1.2
CDK9-202ENST00000421939 POFUT1Q9H488 388 aa22.54■■□□□ 1.2
CDK9-202ENST00000421939 NTN4Q9HB63 628 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms