RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 CCDC92Q53HC0 331 aaPredicted RBP6.77□□□□□ -1.33
VIM-202ENST00000421459 CYBRD1Q53TN4 286 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 MESTQ5EB52 335 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 INTS11Q5TA45 600 aaKnown RBP6.77□□□□□ -1.33
VIM-202ENST00000421459 AGBL2Q5U5Z8 902 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 C16orf87Q6PH81 154 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 UNQ6126/PRO20091Q6UXV3 157 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 VASH1Q7L8A9 365 aaPredicted RBP6.77□□□□□ -1.33
VIM-202ENST00000421459 HDDC2Q7Z4H3 204 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.77□□□□□ -1.33
VIM-202ENST00000421459 MOGAT3Q86VF5 341 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 KLBQ86Z14 1044 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 NRMQ8IXM6 262 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 BHLHE23Q8NDY6 225 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 OR10S1Q8NGN2 331 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 C10orf82Q8WW14 230 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 DACT3Q96B18 629 aaPredicted RBP6.77□□□□□ -1.33
VIM-202ENST00000421459 TPD52L3Q96J77 140 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 MEGF10Q96KG7 1140 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 Q96M85 177 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 ZNF583Q96ND8 569 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 TMEM246Q9BRR3 403 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 CDADC1Q9BWV3 514 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 SSBP3Q9BWW4 388 aaPredicted RBP6.77□□□□□ -1.33
VIM-202ENST00000421459 RABEP2Q9H5N1 569 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 RERGLQ9H628 205 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 MARCH7Q9H992 704 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 MAN2C1Q9NTJ4 1040 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 TBCCD1Q9NVR7 557 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 OR5V1Q9UGF6 321 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 IL19Q9UHD0 177 aa6.77□□□□□ -1.33
VIM-202ENST00000421459 IGHV2-70DA0A0C4DH43 119 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 A0A0G2JND7 137 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 NPIPB13A6NJU9 1138 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 EFCAB9A8MZ26 197 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 HMGB1P1B2RPK0 211 aaPredicted RBP6.76□□□□□ -1.33
VIM-202ENST00000421459 NPIPB4C9JG80 1138 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 F5H5P2 479 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 H3BSA7 217 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 CDC42EP2O14613 210 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 FFAR1O14842 300 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 RER1O15258 196 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 MLNRO43193 412 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 SGCEO43556 437 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 IGF2P01344 180 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 HLA-DPB1P04440 258 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 CTLA4P16410 223 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 GSTM3P21266 225 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 KDELR2P33947 212 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 GUCA1AP43080 201 aaPredicted RBP6.76□□□□□ -1.33
VIM-202ENST00000421459 GPR4P46093 362 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 MTNR1AP48039 350 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 SLC9A3P48764 834 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 FGF12P61328 243 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 GNB2P62879 340 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 MEP1BQ16820 701 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 HSP90B2PQ58FF3 399 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 ZMAT1Q5H9K5 638 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 SLC27A4Q6P1M0 643 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 ARL9Q6T311 187 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 FIP1L1Q6UN15 594 aaKnown RBP6.76□□□□□ -1.33
VIM-202ENST00000421459 C9orf139Q6ZV77 190 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 RHOUQ7L0Q8 258 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 VTCN1Q7Z7D3 282 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 ZER1Q7Z7L7 766 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 OAFQ86UD1 273 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 DYDC1Q8WWB3 177 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 RASSF5Q8WWW0 418 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 RAB40AQ8WXH6 277 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 PTP4A1Q93096 173 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 UPRTQ96BW1 309 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 RASD2Q96D21 266 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 ATP6V1G3Q96LB4 118 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 ECSITQ9BQ95 431 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 CHIAQ9BZP6 476 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 C1RLQ9NZP8 487 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 STX18Q9P2W9 335 aaKnown RBP6.76□□□□□ -1.33
VIM-202ENST00000421459 ASH2LQ9UBL3 628 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 CGGBP1Q9UFW8 167 aaPredicted RBP6.76□□□□□ -1.33
VIM-202ENST00000421459 IL20RAQ9UHF4 553 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 BAG5Q9UL15 447 aa6.76□□□□□ -1.33
VIM-202ENST00000421459 NDRG4Q9ULP0 352 aaKnown RBP6.76□□□□□ -1.33
VIM-202ENST00000421459 COA3Q9Y2R0 106 aaPredicted RBP6.76□□□□□ -1.33
VIM-202ENST00000421459 A0A087WUU8 490 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 KIR2DS1A0A191URI9 304 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 OR6C6A6NF89 314 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 A6NIZ1 184 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 C22orf46C9J442 243 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 CLDN34H7C241 214 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 SLC16A7O60669 478 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 KNG1P01042 644 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 SFTPBP07988 381 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 COX5BP10606 129 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 RPL4P36578 427 aaKnown RBP6.75□□□□□ -1.33
VIM-202ENST00000421459 RAP1BP61224 184 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 RAP1AP62834 184 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 GUCY1A3Q02108 690 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 PRKCDQ05655 676 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 ST3GAL3Q11203 375 aa6.75□□□□□ -1.33
VIM-202ENST00000421459 CYLC2Q14093 348 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms