RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 ZNF431Q8TF32 576 aaPredicted RBP9.76□□□□□ -0.85
DDX56-203ENST00000421223 MCHR2Q969V1 340 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.76□□□□□ -0.85
DDX56-203ENST00000421223 GHITMQ9H3K2 345 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 ALKBH4Q9NXW9 302 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 B3GALT5Q9Y2C3 310 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 RER1O15258 196 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 WDPCPO95876 746 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 UMODP07911 640 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 BTF3P20290 206 aaKnown RBP9.76□□□□□ -0.85
DDX56-203ENST00000421223 HTR2CP28335 458 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 PCOLCEQ15113 449 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 B3GNTL1Q67FW5 361 aaPredicted RBP9.76□□□□□ -0.85
DDX56-203ENST00000421223 GLT8D1Q68CQ7 371 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 ASPHD2Q6ICH7 369 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 C5orf46Q6UWT4 87 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 Q6ZTK2 550 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 BTN2A1Q7KYR7 527 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 CHMP1BQ7LBR1 199 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 CATSPERDQ86XM0 798 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 LRRC18Q8N456 261 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 MEIOBQ8N635 442 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 ACBD4Q8NC06 268 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 OR13C9Q8NGT0 318 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 OR56B4Q8NH76 319 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 FAM71F1Q96KD3 344 aaPredicted RBP9.76□□□□□ -0.85
DDX56-203ENST00000421223 HS3ST3B1Q9Y662 390 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 MRPS18BQ9Y676 258 aaKnown RBP9.76□□□□□ -0.85
DDX56-203ENST00000421223 R4GMQ9 66 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 NUP210LQ5VU65 1888 aa9.76□□□□□ -0.85
DDX56-203ENST00000421223 SYT7O43581 403 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 CTAG2O75638 210 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 QDPRP09417 244 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 ZNF468Q5VIY5 522 aaPredicted RBP9.75□□□□□ -0.85
DDX56-203ENST00000421223 LYPD8Q6UX82 237 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 RPS19BP1Q86WX3 136 aaKnown RBP9.75□□□□□ -0.85
DDX56-203ENST00000421223 OR11G2Q8NGC1 345 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 OR8H1Q8NGG4 311 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 OR52B4Q8NGK2 314 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 PCNPQ8WW12 178 aaKnown RBP9.75□□□□□ -0.85
DDX56-203ENST00000421223 SCMH1Q96GD3 660 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 SOX7Q9BT81 388 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 METTL17Q9H7H0 456 aaPredicted RBP9.75□□□□□ -0.85
DDX56-203ENST00000421223 HPF1Q9NWY4 346 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 B3GAT1Q9P2W7 334 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 FARSAQ9Y285 508 aaKnown RBP9.75□□□□□ -0.85
DDX56-203ENST00000421223 TMEM272A0A1B0GTI8 110 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 A0A1W2PQ72 361 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 GGT3PA6NGU5 568 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 GLSO94925 669 aaPredicted RBP9.75□□□□□ -0.85
DDX56-203ENST00000421223 CER1O95813 267 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 IGHG1P01857 330 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 ANXA3P12429 323 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 NAGAP17050 411 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 TCN2P20062 427 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 GUCA1AP43080 201 aaPredicted RBP9.75□□□□□ -0.85
DDX56-203ENST00000421223 IL11RAQ14626 422 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 TEX30Q5JUR7 227 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 CFAP77Q6ZQR2 320 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 WDR5BQ86VZ2 330 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 ZNF454Q8N9F8 522 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 SPERTQ8NA61 448 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 OR51E1Q8TCB6 317 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 ST7LQ8TDW4 575 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 NPRL2Q8WTW4 380 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 CITED4Q96RK1 184 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 UCN2Q96RP3 112 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 ARRDC1-AS1Q9H2J1 176 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 EIF3KQ9UBQ5 218 aaKnown RBP9.75□□□□□ -0.85
DDX56-203ENST00000421223 PISDQ9UG56 409 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 DKKL1Q9UK85 242 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 ARID1AO14497 2285 aa9.75□□□□□ -0.85
DDX56-203ENST00000421223 ZNF208O43345 1280 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 TRAPPC6AO75865 159 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 ECDO95905 644 aaPredicted RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 MSX1P28360 303 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 PRSS3P35030 304 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 SLC6A9P48067 706 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 DUSP3P51452 185 aaPredicted RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 SUMO3P55854 103 aaPredicted RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 ROM1Q03395 351 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 DYRK1AQ13627 763 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 YRDCQ86U90 279 aaKnown RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 BIVMQ86UB2 503 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 OR2T35Q8NGX2 323 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 SNAPC3Q92966 411 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 CMBLQ96DG6 245 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 RBM24Q9BX46 236 aaKnown RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 C1orf198Q9H425 327 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 COPZ2Q9P299 210 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 CHCHD2Q9Y6H1 151 aaPredicted RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 LOC100289279A0A1B0GTE1 492 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 F5H5K5 113 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 M0QYG6 137 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 ERVH48-1M5A8F1 160 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 XRCC3O43542 346 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 GSTZ1O43708 216 aaPredicted RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 KLF7O75840 302 aaPredicted RBP9.74□□□□□ -0.85
DDX56-203ENST00000421223 FGF5P12034 268 aa9.74□□□□□ -0.85
DDX56-203ENST00000421223 LAP3P28838 519 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms