RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 PRMT8Q9NR22 394 aaPredicted RBP13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 ATXN7L1Q9ULK2 861 aaPredicted RBP13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 HHLA2Q9UM44 414 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 C13orf42A0A1B0GVH6 325 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 PRAMEF26H0Y7S4 382 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 GABRG2P18507 467 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 C11orf87Q6NUJ2 197 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 ESX1Q8N693 406 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 NUDCD2Q8WVJ2 157 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 TCTN2Q96GX1 697 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 ADAM19Q9H013 955 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 RASL12Q9NYN1 266 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 DHCR7Q9UBM7 475 aaKnown RBP13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 SPTY2D1-AS1A0A0U1RR47 76 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 P2RY10O00398 339 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 HLA-DOBP13765 273 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 ZNF823P16415 610 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 IL13RA1P78552 427 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 GLO1Q04760 184 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 FMODQ06828 376 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 OR4D6Q8NGJ1 314 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 OR13C8Q8NGS7 320 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 ZNF416Q9BWM5 594 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 LAT2Q9GZY6 243 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 C1orf198Q9H425 327 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 SLC17A5Q9NRA2 495 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 PCDHB16Q9NRJ7 776 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 VSIG4Q9Y279 399 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 TMED7Q9Y3B3 224 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 OR2AT4A6NND4 320 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 DISC1C4P0D8 188 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 PRKACAP17612 351 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 PRKXP51817 358 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 PPP1R1AQ13522 171 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 TEX30Q5JUR7 227 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 FAM166AQ6J272 317 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 JMJD6Q6NYC1 403 aaPredicted RBP13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 DCXRQ7Z4W1 244 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 TRAPPC6BQ86SZ2 158 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 DEFB119Q8N690 84 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 SLC46A1Q96NT5 459 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 CST11Q9H112 138 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 S1PR5Q9H228 398 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 ASF1BQ9NVP2 202 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 SLC39A1Q9NY26 324 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 TMED7-TICAM2A0A0A6YYA0 188 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 IGHV5-51A0A0C4DH38 117 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 TMEM269A0A1B0GVZ9 245 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 C5orf51A6NDU8 294 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 IGHV4-34P06331 123 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 CNR1P21554 472 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 SLC6A8P48029 635 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 PLCXD2Q0VAA5 305 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 RAB30Q15771 203 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 OR2W3Q7Z3T1 314 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 FJX1Q86VR8 437 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 TMEM17Q86X19 198 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 CATSPERDQ86XM0 798 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 ADAMTS18Q8TE60 1221 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 HS3ST3A1Q9Y663 406 aa13.61□□□□□ -0.23
SEMA3B-203ENST00000419007 LOC101059948A0A1B0GTJ6 334 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 C2orf72A6NCS6 295 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 SSBP1Q04837 148 aaKnown RBP13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 ELOCQ15369 112 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 SGCBQ16585 318 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 FDX2Q6P4F2 183 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 KCNRGQ8N5I3 272 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 INO80EQ8NBZ0 244 aaPredicted RBP13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 OR52N5Q8NH56 324 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 THAP6Q8TBB0 222 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 GPR119Q8TDV5 335 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 C8orf44Q96CB5 159 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 NUDT9Q9BW91 350 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 SAV1Q9H4B6 383 aaPredicted RBP13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 UNC13CQ8NB66 2214 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 IGLV1-36A0A0B4J1U3 117 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 HSPB2A8KAH6 182 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 SULT1C2O00338 296 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 ZNF735P0CB33 412 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 PGCP20142 388 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 ZNF169Q14929 603 aaPredicted RBP13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 HSPB2Q16082 182 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 FGGYQ96C11 551 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 PELOQ9BRX2 385 aaKnown RBP13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 TXNIPQ9H3M7 391 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 SCPEP1Q9HB40 452 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 TNFSF18Q9UNG2 199 aa13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 ASCC3Q8N3C0 2202 aaKnown RBP13.6□□□□□ -0.23
SEMA3B-203ENST00000419007 OR14I1A6ND48 311 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 METTL21EPA6NDL7 271 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 C1orf140Q5VVS0 124 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 TMEM88Q6PEY1 159 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 EIF4E3Q8N5X7 224 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 LRRC61Q9BV99 259 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 OR52A1Q9UKL2 312 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 BLACEA4D250 179 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 DNASE2O00115 360 aaPredicted RBP13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 BCL2L11O43521 198 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 AHSA1O95433 338 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms