RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 Q6ZPB1 254 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 RTL4Q6ZR62 310 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 Q6ZRP5 223 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 TPGS1Q6ZTW0 290 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CHMP1BQ7LBR1 199 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 HSD17B13Q7Z5P4 300 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 CPEB2Q7Z5Q1 589 aaKnown RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 TSEN54Q7Z6J9 526 aaKnown RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 ADGRD2Q7Z7M1 963 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 GALNT10Q86SR1 603 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 GLRX5Q86SX6 157 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 KRTAP7-1Q8IUC3 87 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 NAXDQ8IW45 347 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 GPR65Q8IYL9 337 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CLECL1Q8IZS7 167 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 C10orf111Q8N326 155 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 PRSS35Q8N3Z0 413 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 TOMM5Q8N4H5 51 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 EIF4E3Q8N5X7 224 aaKnown RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 EID2Q8N6I1 236 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 ZNF557Q8N988 423 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 DCAF4L2Q8NA75 395 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 UXS1Q8NBZ7 420 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 FAM71CQ8NEG0 241 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 OR4M1Q8NGD0 313 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 OR9Q2Q8NGE9 314 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 OR52I1Q8NGK6 324 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 OR10Z1Q8NGY1 313 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 OR56B4Q8NH76 319 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 NEIL3Q8TAT5 605 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 ZNF519Q8TB69 540 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 TEX47Q8TBZ9 253 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CXorf40AQ8TE69 158 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 C15orf40Q8WUR7 153 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 ASZ1Q8WWH4 475 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 ELMO1Q92556 727 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 RIT1Q92963 219 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 RBPMSQ93062 196 aaKnown RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 RFT1Q96AA3 541 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CIDECQ96AQ7 238 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 PPCDCQ96CD2 204 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 WDR34Q96EX3 536 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 C11orf24Q96F05 449 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 ZBED6CLQ96FA7 236 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 BSCL2Q96G97 398 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 B3GALT6Q96L58 329 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 OR4K3Q96R72 315 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 COPS8Q99627 209 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 ATF6BQ99941 703 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 P2RY13Q9BPV8 354 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 SLC35A5Q9BS91 424 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 ZSCAN5AQ9BUG6 496 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 EFCAB11Q9BUY7 163 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 BEX2Q9BXY8 128 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 EBPLQ9BY08 206 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 NLNQ9BYT8 704 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 ZNF436Q9C0F3 470 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 GFRA4Q9GZZ7 299 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 HDHD2Q9H0R4 259 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 OR51B5Q9H339 312 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 ANKRD19PQ9H560 264 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 REEP4Q9H6H4 257 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 AMBNQ9NP70 447 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 PHPT1Q9NRX4 125 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 TMEM161AQ9NX61 479 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 COMMD3Q9UBI1 195 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 ATPIF1Q9UII2 106 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 MOSPD1Q9UJG1 213 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 ZNF222Q9UK12 451 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 MGAT4AQ9UM21 535 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 BAIAP2Q9UQB8 552 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 LIPT1Q9Y234 373 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 SLC9A8Q9Y2E8 581 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 NPTNQ9Y639 398 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 CACNG2Q9Y698 323 aa2.25□□□□□ -2.05
VPS41-206ENST00000418457 ZFP37Q9Y6Q3 630 aaPredicted RBP2.25□□□□□ -2.05
VPS41-206ENST00000418457 SCN10AQ9Y5Y9 1956 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 TRAV18A0A075B6X5 111 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 ARPC4-TTLL3A0A0A6YYG9 625 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 A0A0D9SEW6 157 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 A0A1B0GUH1 482 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 GSAPA4D1B5 854 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 MTMR11A4FU01 709 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 OR6C65A6NJZ3 312 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 GABRR3A8MPY1 467 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 IQCF5A8MTL0 148 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 HMSDA8MTL9 139 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PRSS46E5RG02 174 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 LRRN3E7EW58 273 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 NPIPA3F8WFD2 350 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 H0YC42 278 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 H7C423 109 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PDHXO00330 501 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 GABRPO00591 440 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 TOR1AO14656 332 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 ABCD4O14678 606 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 LRRTM2O43300 516 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 ZNF749O43361 778 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 AKR7A2O43488 359 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 TLX2O43763 284 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms