RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 ZNF469Q96JG9 3925 aaPredicted RBP9.04□□□□□ -0.96
RFC1-203ENST00000418436 CHD3Q12873 2000 aaKnown RBP9.04□□□□□ -0.96
RFC1-203ENST00000418436 MAP1AP78559 2803 aaPredicted RBP9.04□□□□□ -0.96
RFC1-203ENST00000418436 OR6C6A6NF89 314 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 RIIAD1A6NNX1 92 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 FAM171A2A8MVW0 826 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 SURF4O15260 269 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 SGCEO43556 437 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 SYNGR3O43761 229 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 NDUFS7O75251 213 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 IGHV4-39P01824 125 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 HMGN1P05114 100 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 ZNF23P17027 643 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 ZNF3P17036 446 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 POU1F1P28069 291 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 PYCR1P32322 319 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 GGT2P36268 569 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 WNT5AP41221 380 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 RAD52P43351 418 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 CENPAP49450 140 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 GDI2P50395 445 aaKnown RBP9.04□□□□□ -0.96
RFC1-203ENST00000418436 CRISP1P54107 249 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 UCP2P55851 309 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 RPS23P62266 143 aaKnown RBP9.04□□□□□ -0.96
RFC1-203ENST00000418436 CCDC92Q53HC0 331 aaPredicted RBP9.04□□□□□ -0.96
RFC1-203ENST00000418436 SLC18B1Q6NT16 456 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 DNM1P46Q6ZS02 220 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 ZDHHC13Q8IUH4 622 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 C10orf67Q8IYJ2 551 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 GJC3Q8NFK1 279 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 PTP4A1Q93096 173 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 MRPL24Q96A35 216 aaKnown RBP9.04□□□□□ -0.96
RFC1-203ENST00000418436 BCL2L14Q9BZR8 327 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 CYB5R1Q9UHQ9 305 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 ATPIF1Q9UII2 106 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 KCNG2Q9UJ96 466 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 FBXO9Q9UK97 447 aaPredicted RBP9.04□□□□□ -0.96
RFC1-203ENST00000418436 NDRG4Q9ULP0 352 aaKnown RBP9.04□□□□□ -0.96
RFC1-203ENST00000418436 CMAHPQ9Y471 501 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 PMF1-BGLAPU3KQ54 211 aa9.04□□□□□ -0.96
RFC1-203ENST00000418436 HIVEP1P15822 2718 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 C5orf49A4QMS7 147 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 RER1O15258 196 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 DOK2O60496 412 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 ZNF250P15622 560 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 SPI1P17947 270 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 PPOXP50336 477 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 SNRPD2P62316 118 aaKnown RBP9.03□□□□□ -0.96
RFC1-203ENST00000418436 ESRRGP62508 458 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 PPP2R2BQ00005 443 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 RAB35Q15286 201 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 PCK2Q16822 640 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 LINC01590Q5TEZ4 76 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 TMEM236Q5W0B7 351 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 LURAP1LQ8IV03 231 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 C1orf174Q8IYL3 243 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 ZNF101Q8IZC7 436 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 PROKR2Q8NFJ6 384 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 OR51L1Q8NGJ5 315 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 OR9Q1Q8NGQ5 310 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 OR1F12Q8NHA8 337 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 PKP2Q99959 881 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 OSBPL10Q9BXB5 764 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 HCAR1Q9BXC0 346 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 MRPL37Q9BZE1 423 aaKnown RBP9.03□□□□□ -0.96
RFC1-203ENST00000418436 SEMA6AQ9H2E6 1030 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 BARX1Q9HBU1 254 aaPredicted RBP9.03□□□□□ -0.96
RFC1-203ENST00000418436 KRT84Q9NSB2 600 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 PLEK2Q9NYT0 353 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 KIF17Q9P2E2 1029 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 EIF3KQ9UBQ5 218 aaKnown RBP9.03□□□□□ -0.96
RFC1-203ENST00000418436 TMEFF2Q9UIK5 374 aaPredicted RBP9.03□□□□□ -0.96
RFC1-203ENST00000418436 OAZ3Q9UMX2 235 aa9.03□□□□□ -0.96
RFC1-203ENST00000418436 IGLV3-9A0A075B6K5 115 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 FAM183AA6NL82 134 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 MITFO75030 526 aaPredicted RBP9.02□□□□□ -0.97
RFC1-203ENST00000418436 HLA-DQA2P01906 255 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 GYPBP06028 91 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 CLUP10909 449 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 ZNF823P16415 610 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 CCNOP22674 350 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 FMO3P31513 532 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 HTR5AP47898 357 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 BLVRAP53004 296 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 ERVS71-1P61550 626 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 DOC2BQ14184 412 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 PTGES3Q15185 160 aaKnown RBP9.02□□□□□ -0.97
RFC1-203ENST00000418436 RSPO1Q2MKA7 263 aaPredicted RBP9.02□□□□□ -0.97
RFC1-203ENST00000418436 KRTAP27-1Q3LI81 207 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 TEX30Q5JUR7 227 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 ELFN2Q5R3F8 820 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 RGS7BPQ6MZT1 257 aaPredicted RBP9.02□□□□□ -0.97
RFC1-203ENST00000418436 CORO6Q6QEF8 472 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 UNQ6126/PRO20091Q6UXV3 157 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 CFAP77Q6ZQR2 320 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.02□□□□□ -0.97
RFC1-203ENST00000418436 LRP11Q86VZ4 500 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 OR10H5Q8NGA6 315 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 OR1J1Q8NGS3 322 aa9.02□□□□□ -0.97
RFC1-203ENST00000418436 C4orf45Q96LM5 186 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms