RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 NME2P1O60361 137 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 SCN2BO60939 215 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 WDR1O75083 606 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 RDH16O75452 317 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 FADS2O95864 444 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 APOC3P02656 99 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 CRYBA1P05813 215 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 HIST1H2AGP0C0S8 130 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 HKR1P10072 659 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ST6GAL1P15907 406 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 HIST1H2ADP20671 130 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 CD1BP29016 333 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 BDKRB2P30411 391 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 SHMT2P34897 504 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 RPL22P35268 128 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ACVR1BP36896 505 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC1A2P43004 574 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF81P51508 661 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 EFNA3P52797 238 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 CDH11P55287 796 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ACTBP60709 375 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ACTA2P62736 377 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ACTG2P63267 376 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ACTC1P68032 377 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ACTA1P68133 377 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 EMX2Q04743 252 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF79Q15937 498 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 NDUFAF6Q330K2 333 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 MOGAT2Q3SYC2 334 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ACTBL2Q562R1 376 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF691Q5VV52 312 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 MEDAGQ5VYS4 303 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 SAXO2Q658L1 398 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 FAM90A2PQ658T7 463 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 HIST2H2AA3Q6FI13 130 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 GRHL2Q6ISB3 625 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 FAM166AQ6J272 317 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 VWA1Q6PCB0 445 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ULK3Q6PHR2 472 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 WASH2PQ6VEQ5 465 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 Q6ZPA2 131 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 CDHR3Q6ZTQ4 885 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 CYS1Q717R9 158 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 LHFPL4Q7Z7J7 247 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 OAFQ86UD1 273 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 MYPOPQ86VE0 399 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 RANBP3LQ86VV4 465 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 FUNDC1Q8IVP5 155 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 CFAP206Q8IYR0 622 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ADGRF3Q8IZF5 1079 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 OFCC1Q8IZS5 231 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF555Q8NEP9 628 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 OR52N4Q8NGI2 321 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 OR51A7Q8NH64 312 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 OIT3Q8WWZ8 545 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 AP3S1Q92572 193 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 KCNJ9Q92806 393 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 MRPL24Q96A35 216 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 CTHRC1Q96CG8 243 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 RCN3Q96D15 328 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 CMBLQ96DG6 245 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 PIK3IP1Q96FE7 263 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 TRMT61AQ96FX7 289 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 SMIM8Q96KF7 97 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 C20orf173Q96LM9 149 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 SPATA13Q96N96 652 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 TNFRSF13CQ96RJ3 184 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 MTERF1Q99551 399 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 CPNE1Q99829 537 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 EBNA1BP2Q99848 306 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 CMSS1Q9BQ75 279 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 CHCHD6Q9BRQ6 235 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 TMEM208Q9BTX3 173 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF426Q9BUY5 554 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 DGCR6LQ9BY27 220 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 PARD6GQ9BYG4 376 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 TOR3AQ9H497 397 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ACOT13Q9NPJ3 140 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 TRIM36Q9NQ86 728 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC35D1Q9NTN3 355 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 PLEK2Q9NYT0 353 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 PDP1Q9P0J1 537 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 C3orf18Q9UK00 162 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 FBXL2Q9UKC9 423 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 DNPEPQ9ULA0 475 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 FZD10Q9ULW2 581 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 MOKQ9UQ07 419 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 A0A096LNT2 108 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 LOC105369274A0A096LPK9 316 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 LOC102723532A0A0G2JNH3 316 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 A0A1B0GX78 115 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 A6NLC8 198 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 DEFB108AA8MXU0 73 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 DISC1C4P0D8 188 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 MRASO14807 208 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 UBDO15205 165 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SPRY2O43597 315 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC25A17O43808 307 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 XPNPEP2O43895 674 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 CYTIPO60759 359 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms