RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 CCL17Q92583 94 aa21.51■■□□□ 1.03
VEGFA-208ENST00000417285 COG8Q96MW5 612 aa21.51■■□□□ 1.03
VEGFA-208ENST00000417285 RERGLQ9H628 205 aa21.51■■□□□ 1.03
VEGFA-208ENST00000417285 SGCEO43556 437 aa21.5■■□□□ 1.03
VEGFA-208ENST00000417285 ABHD16AO95870 558 aa21.5■■□□□ 1.03
VEGFA-208ENST00000417285 TXNDC12O95881 172 aa21.5■■□□□ 1.03
VEGFA-208ENST00000417285 CD55P08174 381 aa21.5■■□□□ 1.03
VEGFA-208ENST00000417285 IFNGR2P38484 337 aa21.5■■□□□ 1.03
VEGFA-208ENST00000417285 HTR5AP47898 357 aa21.5■■□□□ 1.03
VEGFA-208ENST00000417285 MNAT1P51948 309 aa21.5■■□□□ 1.03
VEGFA-208ENST00000417285 FXYD6P3P58550 94 aa21.5■■□□□ 1.03
VEGFA-208ENST00000417285 LSM6P62312 80 aaKnown RBP21.5■■□□□ 1.03
VEGFA-208ENST00000417285 AQP6Q13520 282 aa21.5■■□□□ 1.03
VEGFA-208ENST00000417285 PEG10Q86TG7 708 aaKnown RBP21.5■■□□□ 1.03
VEGFA-208ENST00000417285 FANK1Q8TC84 345 aa21.5■■□□□ 1.03
VEGFA-208ENST00000417285 OCEL1Q9H607 264 aa21.5■■□□□ 1.03
VEGFA-208ENST00000417285 METTL17Q9H7H0 456 aaPredicted RBP21.5■■□□□ 1.03
VEGFA-208ENST00000417285 ZSCAN5BA6NJL1 495 aa21.49■■□□□ 1.03
VEGFA-208ENST00000417285 MPZL1O95297 269 aa21.49■■□□□ 1.03
VEGFA-208ENST00000417285 PNPP00491 289 aa21.49■■□□□ 1.03
VEGFA-208ENST00000417285 PSG7Q13046 419 aa21.49■■□□□ 1.03
VEGFA-208ENST00000417285 CDK5R2Q13319 367 aa21.49■■□□□ 1.03
VEGFA-208ENST00000417285 MTX3Q5HYI7 312 aa21.49■■□□□ 1.03
VEGFA-208ENST00000417285 TMEM255AQ5JRV8 349 aa21.49■■□□□ 1.03
VEGFA-208ENST00000417285 DNM1P34Q6PK57 102 aa21.49■■□□□ 1.03
VEGFA-208ENST00000417285 GPA33Q99795 319 aa21.49■■□□□ 1.03
VEGFA-208ENST00000417285 IL1RAPQ9NPH3 570 aa21.49■■□□□ 1.03
VEGFA-208ENST00000417285 TMCC3Q9ULS5 477 aa21.49■■□□□ 1.03
VEGFA-208ENST00000417285 COA3Q9Y2R0 106 aaPredicted RBP21.49■■□□□ 1.03
VEGFA-208ENST00000417285 CACNG2Q9Y698 323 aa21.49■■□□□ 1.03
VEGFA-208ENST00000417285 PLPP2O43688 288 aa21.48■■□□□ 1.03
VEGFA-208ENST00000417285 TIMM8AO60220 97 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-208ENST00000417285 OR10H3O60404 316 aa21.48■■□□□ 1.03
VEGFA-208ENST00000417285 DEAF1O75398 565 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-208ENST00000417285 UBOX5O94941 541 aa21.48■■□□□ 1.03
VEGFA-208ENST00000417285 IGHV2-5P01817 119 aa21.48■■□□□ 1.03
VEGFA-208ENST00000417285 SLC6A6P31641 620 aa21.48■■□□□ 1.03
VEGFA-208ENST00000417285 RFX4Q33E94 735 aa21.48■■□□□ 1.03
VEGFA-208ENST00000417285 PTCHD4Q6ZW05 846 aa21.48■■□□□ 1.03
VEGFA-208ENST00000417285 VASH1Q7L8A9 365 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-208ENST00000417285 ERMAPQ96PL5 475 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-208ENST00000417285 NUAK2Q9H093 628 aa21.48■■□□□ 1.03
VEGFA-208ENST00000417285 G6PC2Q9NQR9 355 aa21.48■■□□□ 1.03
VEGFA-208ENST00000417285 PLEK2Q9NYT0 353 aa21.48■■□□□ 1.03
VEGFA-208ENST00000417285 J3QLI3 93 aa21.47■■□□□ 1.03
VEGFA-208ENST00000417285 IMPA2O14732 288 aa21.47■■□□□ 1.03
VEGFA-208ENST00000417285 PPP1R3DO95685 299 aa21.47■■□□□ 1.03
VEGFA-208ENST00000417285 TNFSF4P23510 183 aa21.47■■□□□ 1.03
VEGFA-208ENST00000417285 FPR3P25089 353 aa21.47■■□□□ 1.03
VEGFA-208ENST00000417285 CRABP1P29762 137 aa21.47■■□□□ 1.03
VEGFA-208ENST00000417285 RRM2P31350 389 aa21.47■■□□□ 1.03
VEGFA-208ENST00000417285 CDKN2AP42771 156 aaKnown RBP21.47■■□□□ 1.03
VEGFA-208ENST00000417285 ZDHHC21Q8IVQ6 265 aa21.47■■□□□ 1.03
VEGFA-208ENST00000417285 ZFAND2BQ8WV99 257 aa21.47■■□□□ 1.03
VEGFA-208ENST00000417285 PTP4A1Q93096 173 aa21.47■■□□□ 1.03
VEGFA-208ENST00000417285 OR52D1Q9H346 318 aa21.47■■□□□ 1.03
VEGFA-208ENST00000417285 MSL2Q9HCI7 577 aa21.47■■□□□ 1.03
VEGFA-208ENST00000417285 ASH2LQ9UBL3 628 aa21.47■■□□□ 1.03
VEGFA-208ENST00000417285 A0A0G2JMP0 313 aa21.46■■□□□ 1.03
VEGFA-208ENST00000417285 A0A0X1KG70 313 aa21.46■■□□□ 1.03
VEGFA-208ENST00000417285 KITLGP21583 273 aa21.46■■□□□ 1.03
VEGFA-208ENST00000417285 GATA3P23771 443 aa21.46■■□□□ 1.03
VEGFA-208ENST00000417285 TNFAIP6P98066 277 aaPredicted RBP21.46■■□□□ 1.03
VEGFA-208ENST00000417285 KCNMB1Q16558 191 aa21.46■■□□□ 1.03
VEGFA-208ENST00000417285 PGM2L1Q6PCE3 622 aa21.46■■□□□ 1.03
VEGFA-208ENST00000417285 JAZF1Q86VZ6 243 aa21.46■■□□□ 1.03
VEGFA-208ENST00000417285 OR4M2Q8NGB6 313 aa21.46■■□□□ 1.03
VEGFA-208ENST00000417285 HAVCR1Q96D42 359 aa21.46■■□□□ 1.03
VEGFA-208ENST00000417285 DCLRE1CQ96SD1 692 aaKnown RBP21.46■■□□□ 1.03
VEGFA-208ENST00000417285 GAL3ST1Q99999 423 aa21.46■■□□□ 1.03
VEGFA-208ENST00000417285 ATPIF1Q9UII2 106 aa21.46■■□□□ 1.03
VEGFA-208ENST00000417285 PURGQ9UJV8 347 aaKnown RBP21.46■■□□□ 1.03
VEGFA-208ENST00000417285 POLR1DQ9Y2S0 133 aa21.46■■□□□ 1.03
VEGFA-208ENST00000417285 STARD10Q9Y365 291 aa21.46■■□□□ 1.03
VEGFA-208ENST00000417285 J3QW42 95 aa21.45■■□□□ 1.02
VEGFA-208ENST00000417285 TNFRSF1AP19438 455 aa21.45■■□□□ 1.02
VEGFA-208ENST00000417285 CENPAP49450 140 aa21.45■■□□□ 1.02
VEGFA-208ENST00000417285 OR1F12Q8NHA8 337 aa21.45■■□□□ 1.02
VEGFA-208ENST00000417285 GNPDA2Q8TDQ7 276 aa21.45■■□□□ 1.02
VEGFA-208ENST00000417285 ZNF418Q8TF45 676 aaPredicted RBP21.45■■□□□ 1.02
VEGFA-208ENST00000417285 CMBLQ96DG6 245 aa21.45■■□□□ 1.02
VEGFA-208ENST00000417285 SAMD8Q96LT4 415 aa21.45■■□□□ 1.02
VEGFA-208ENST00000417285 OR6C6A6NF89 314 aa21.44■■□□□ 1.02
VEGFA-208ENST00000417285 ARPC3O15145 178 aa21.44■■□□□ 1.02
VEGFA-208ENST00000417285 SURF4O15260 269 aa21.44■■□□□ 1.02
VEGFA-208ENST00000417285 KRT36O76013 467 aa21.44■■□□□ 1.02
VEGFA-208ENST00000417285 RENP00797 406 aa21.44■■□□□ 1.02
VEGFA-208ENST00000417285 RGS6P49758 472 aa21.44■■□□□ 1.02
VEGFA-208ENST00000417285 LEG1Q6P5S2 330 aa21.44■■□□□ 1.02
VEGFA-208ENST00000417285 OR5L1Q8NGL2 311 aa21.44■■□□□ 1.02
VEGFA-208ENST00000417285 CCT8L2Q96SF2 557 aa21.44■■□□□ 1.02
VEGFA-208ENST00000417285 IFT27Q9BW83 186 aa21.44■■□□□ 1.02
VEGFA-208ENST00000417285 ACTR3BQ9P1U1 418 aa21.44■■□□□ 1.02
VEGFA-208ENST00000417285 B2RBV5 119 aa21.43■■□□□ 1.02
VEGFA-208ENST00000417285 RAC2P15153 192 aa21.43■■□□□ 1.02
VEGFA-208ENST00000417285 NOS3P29474 1203 aa21.43■■□□□ 1.02
VEGFA-208ENST00000417285 GSSP48637 474 aa21.43■■□□□ 1.02
VEGFA-208ENST00000417285 TSPAN31Q12999 210 aa21.43■■□□□ 1.02
VEGFA-208ENST00000417285 DCAF12L2Q5VW00 463 aa21.43■■□□□ 1.02
VEGFA-208ENST00000417285 OTPQ5XKR4 325 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms