RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 TMEM53Q6P2H8 277 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 ANKRD16Q6P6B7 361 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 CD200R1LQ6Q8B3 271 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZNF704Q6ZNC4 412 aaPredicted RBP12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 HIST2H3AQ71DI3 136 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 CCDC36Q8IYA8 594 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZNF676Q8N7Q3 588 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 OR2G2Q8NGZ5 317 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 NANOS1Q8WY41 292 aaKnown RBP12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 PHYHIPQ92561 330 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 RPL3LQ92901 407 aaKnown RBP12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 SPTSSAQ969W0 71 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 KCTD7Q96MP8 289 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 KCNJ15Q99712 375 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 SH3GL3Q99963 347 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 SP140LQ9H930 580 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 TXNL4BQ9NX01 149 aaKnown RBP12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 PLEK2Q9NYT0 353 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 GTF2A1LQ9UNN4 478 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZNF835Q9Y2P0 537 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 TRIM64BA6NI03 449 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 ACOD1A6NK06 481 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 LOC110117498-PIK3R3F6TDL0 507 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 GABRPO00591 440 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 SGCEO43556 437 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 HOXB1P14653 301 aaPredicted RBP12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 ARR3P36575 388 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 SERPINB10P48595 397 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 MMP16P51512 607 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 NCS1P62166 190 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 NFATC3Q12968 1075 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 RAB35Q15286 201 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 DGUOKQ16854 277 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 RTL6Q6ICC9 239 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 TMEM211Q6ICI0 200 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 TFAP2EQ6VUC0 442 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 CFAP77Q6ZQR2 320 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 Q6ZT83 130 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 BEND4Q6ZU67 534 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 DOLPP1Q86YN1 238 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 SKA3Q8IX90 412 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 ZNF283Q8N7M2 679 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 RPS4Y2Q8TD47 263 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 ATF6BQ99941 703 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 CENPOQ9BU64 300 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 HDHD5Q9BXW7 423 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 HDHD2Q9H0R4 259 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 DCSTAMPQ9H295 470 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 MOB1AQ9H8S9 216 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 GALNT8Q9NY28 637 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 FRRS1LQ9P0K9 344 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 OR52A1Q9UKL2 312 aa12.52□□□□□ -0.41
HMGA1P1-201ENST00000415560 PTPRQQ9UMZ3 2332 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 CIB4A0PJX0 185 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 SLC19A2O60779 497 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 ARL6IP5O75915 188 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 UBL3O95164 117 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 CD8BP10966 210 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 ZNF32P17041 273 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 CTSSP25774 331 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 MAPK3P27361 379 aaPredicted RBP12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 CEACAM8P31997 349 aaPredicted RBP12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 SOX6P35712 828 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 TPTEP56180 551 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 FABP5Q01469 135 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 SPCS2Q15005 226 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 ACSM3Q53FZ2 586 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 CCDC92Q53HC0 331 aaPredicted RBP12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 C9orf135Q5VTT2 229 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 TMEM244Q5VVB8 128 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 C22orf42Q6IC83 251 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 CEACAM19Q7Z692 300 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 CATSPERDQ86XM0 798 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 OR10S1Q8NGN2 331 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 OR1K1Q8NGR3 316 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 HTRA1Q92743 480 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 FBXO17Q96EF6 278 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 PGLYRP3Q96LB9 341 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 DOCK7Q96N67 2140 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 DCUN1D5Q9BTE7 237 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 SFXN3Q9BWM7 321 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 DDX28Q9NUL7 540 aaKnown RBP12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 SLC5A6Q9Y289 635 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 FAM215AQ9Y5M1 114 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 FREM2Q5SZK8 3169 aa12.51□□□□□ -0.41
HMGA1P1-201ENST00000415560 A0A1W2PPW3 197 aa12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 DOK2O60496 412 aa12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 ZFPL1O95159 310 aa12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 OPRM1P35372 400 aa12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 NANOS3P60323 173 aaKnown RBP12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 GALK2Q01415 458 aa12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 PLP2Q04941 152 aa12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 WDR38Q5JTN6 314 aa12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 BCL2L15Q5TBC7 163 aa12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 LUZP2Q86TE4 346 aa12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 ST6GALNAC3Q8NDV1 305 aa12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 OR1F12Q8NHA8 337 aa12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 GPR148Q8TDV2 347 aa12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 STARD4Q96DR4 205 aa12.5□□□□□ -0.41
HMGA1P1-201ENST00000415560 C4orf45Q96LM5 186 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms