RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 AZI2Q9H6S1 392 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 LRRC19Q9H756 370 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 NRBP2Q9NSY0 501 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 SLC25A37Q9NYZ2 338 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 STOX2Q9P2F5 926 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 PCYOX1Q9UHG3 505 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 HES2Q9Y543 173 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 SLC25A15Q9Y619 301 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 PLXNA2O75051 1894 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 LRRK1Q38SD2 2015 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 NUP205Q92621 2012 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 CCDC182A6NF36 153 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 C12orf71A8MTZ7 269 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 C12orf77C9JDV5 145 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 F8VP50 259 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 PIRO00625 290 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 POLR3GO15318 223 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 MED7O43513 233 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 GMFGO60234 142 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 SNNO75324 88 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 ERLIN1O75477 346 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 OXSR1O95747 527 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 PAEPP09466 180 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 CCDC172P0C7W6 258 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 DBTP11182 482 aaKnown RBP2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 KCNE1P15382 129 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 TNNI1P19237 187 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 COILP38432 576 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 TFAMQ00059 246 aaKnown RBP2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 DR1Q01658 176 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 OR5I1Q13606 314 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 GOLGA7BQ2TAP0 167 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 PIGGQ5H8A4 983 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 C1orf94Q6P1W5 598 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 KDM7AQ6ZMT4 941 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 FAM183BPQ6ZVS7 135 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 TRIM69Q86WT6 500 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 LRRC52Q8N7C0 313 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 ZNF540Q8NDQ6 660 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 DUSP18Q8NEJ0 188 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 OR4F15Q8NGB8 312 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 OR52M1Q8NGK5 317 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 FANK1Q8TC84 345 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 MAGEE2Q8TD90 523 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 MCOLN3Q8TDD5 553 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 C1orf54Q8WWF1 131 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 DNAJB3Q8WWF6 145 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 GIMAP1Q8WWP7 306 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 MCEEQ96PE7 176 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 SECISBP2Q96T21 854 aaKnown RBP2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 PELOQ9BRX2 385 aaKnown RBP2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 CAPS2Q9BXY5 557 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 LHX5Q9H2C1 402 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 CDC42EP4Q9H3Q1 356 aaKnown RBP2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 ASB7Q9H672 318 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 RNF167Q9H6Y7 350 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 CYP3A43Q9HB55 503 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 TMBIM4Q9HC24 238 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 MED4Q9NPJ6 270 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 GIN1Q9NXP7 522 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 KCNIP1Q9NZI2 227 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 TRAPPC4Q9Y296 219 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 SNX24Q9Y343 169 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 CLUHO75153 1309 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 NRCAMQ92823 1304 aa2.31□□□□□ -2.04
HMGB1P11-201ENST00000413899 RAI1Q7Z5J4 1906 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 PLXND1Q9Y4D7 1925 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 UTRNP46939 3433 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 IGLV4-69A0A075B6H9 119 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 A0A096LNJ9 63 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 RBMY1BA6NDE4 496 aaKnown RBP2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 RBMY1EA6NEQ0 496 aaKnown RBP2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 SIGLEC16A6NMB1 481 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 GOLGA8SH3BPF8 625 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 M0QYV0 167 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 EIF3HO15372 352 aaKnown RBP eCLIP2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 MAGEB4O15481 346 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 SPOPO43791 374 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 MFSD11O43934 449 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 BANF1O75531 89 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 ERLIN2O94905 339 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 CLDN9O95484 217 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 IGLV3-25P01717 112 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 TNNC2P02585 160 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 CALB1P05937 261 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 RBMY1DP0C7P1 496 aaKnown RBP2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 RBMY1A1P0DJD3 496 aaKnown RBP2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 ABOP16442 354 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 WARSP23381 471 aaKnown RBP2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 MIPP30301 263 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 BTCP35070 178 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 SLC1A1P43005 524 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 TFPI2P48307 235 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 IFNAR2P48551 515 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 NMUP48645 174 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 CCR6P51684 374 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 RWDD2BP57060 319 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 ERVK-25P63136 954 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 PAX5Q02548 391 aa2.3□□□□□ -2.04
HMGB1P11-201ENST00000413899 PSG5Q15238 335 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms