RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 CCBE1Q6UXH8 406 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-211ENST00000413186 DGAT2L6Q6ZPD8 337 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 PPP1R32Q7Z5V6 425 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-211ENST00000413186 PXKQ7Z7A4 578 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 KDM8Q8N371 416 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 FCAMRQ8WWV6 532 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 NKD1Q969G9 470 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 SLC22A11Q9NSA0 550 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 TRAPPC4Q9Y296 219 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 COL4A4P53420 1690 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-211ENST00000413186 FXYD6-FXYD2A0A087WZ82 144 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 TMEM269A0A1B0GVZ9 245 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 INMT-MINDY4F8WBC2 141 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 TNFSF11O14788 317 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 NKX2-8O15522 239 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 DNPH1O43598 174 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 TSPAN2O60636 221 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 GABRA1P14867 456 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 HTR5AP47898 357 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 TGIF1Q15583 401 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 CD226Q15762 336 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 RPL22L1Q6P5R6 122 aaKnown RBP7.69□□□□□ -1.18
SYNE1-211ENST00000413186 ASB18Q6ZVZ8 466 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 TMEM99Q8N816 258 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 ARSGQ96EG1 525 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 TMEM41AQ96HV5 264 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 OR14A2Q96R54 314 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 FXYD6Q9H0Q3 95 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 ELOVL3Q9HB03 270 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 IL20Q9NYY1 176 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 IL17BQ9UHF5 180 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 PLEKHA6Q9Y2H5 1048 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 NINQ8N4C6 2090 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 LOC101059948A0A1B0GTJ6 334 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 A0A1W2PQL4 384 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-211ENST00000413186 NAP1L6A6NFF2 107 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 ARPC3O15145 178 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 IGKV3-11P04433 115 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 CCL3P10147 92 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 SKP2Q13309 424 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 ARL6IP1Q15041 203 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 OR4F15Q8NGB8 312 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 CHPT1Q8WUD6 406 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 TMEM100Q9NV29 134 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 DTX4Q9Y2E6 619 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 OR2M5A3KFT3 312 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 SEC14L6B5MCN3 397 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 ATP6V1G2-DDX39BF2Z307 99 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 BMPR1BO00238 502 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 CDX4O14627 284 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-211ENST00000413186 MVDP53602 400 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 FHL5Q5TD97 284 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 CD300LDQ6UXZ3 194 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 VOPP1Q96AW1 172 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 SLC25A44Q96H78 314 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-211ENST00000413186 MED20Q9H944 212 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 HIF1ANQ9NWT6 349 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 TMEM72A0PK05 275 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 PRSS37A4D1T9 235 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 DVL2O14641 736 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 SCGB1D2O95969 90 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 GABRA4P48169 554 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 RAC3P60763 192 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 BDH1Q02338 343 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 ARFRP1Q13795 201 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF709Q8N972 641 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 OR4C5Q8NGB2 326 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 KTI12Q96EK9 354 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-211ENST00000413186 C4orf36Q96KX1 117 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 TEAD3Q99594 435 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 URM1Q9BTM9 101 aaKnown RBP7.68□□□□□ -1.18
SYNE1-211ENST00000413186 EMC6Q9BV81 110 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 GLS2Q9UI32 602 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 TRGV8A0A0C4DH27 118 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 TMEM218A2RU14 115 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 PSMD9O00233 223 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 SCGB1C2P0DMR2 95 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 BMP4P12644 408 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 HIST1H1CP16403 213 aaKnown RBP7.68□□□□□ -1.18
SYNE1-211ENST00000413186 CD96P40200 585 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 C9orf135Q5VTT2 229 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 TMEM211Q6ICI0 200 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 ACSM5Q6NUN0 579 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 PGAP1Q75T13 922 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 KIF18BQ86Y91 864 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 OR2M7Q8NG81 312 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 OR2M3Q8NG83 312 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 OR8S1Q8NH09 359 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 C2CD4CQ8TF44 421 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 ANGPTL4Q9BY76 406 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 SCP2D1Q9UJQ7 156 aa7.68□□□□□ -1.18
SYNE1-211ENST00000413186 A0A0A6YYJ9 748 aa7.67□□□□□ -1.18
SYNE1-211ENST00000413186 TRDV1A0A1B0GX56 115 aa7.67□□□□□ -1.18
SYNE1-211ENST00000413186 FUOMA2VDF0 154 aa7.67□□□□□ -1.18
SYNE1-211ENST00000413186 SOCS6O14544 535 aa7.67□□□□□ -1.18
SYNE1-211ENST00000413186 RBBP9O75884 186 aa7.67□□□□□ -1.18
SYNE1-211ENST00000413186 GSTT2P0CG29 244 aa7.67□□□□□ -1.18
SYNE1-211ENST00000413186 SOX8P57073 446 aa7.67□□□□□ -1.18
SYNE1-211ENST00000413186 HABP2Q14520 560 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms