RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 A0A0G2JLM5 398 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 GOLGA6L10A6NI86 522 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF726A6NNF4 738 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 ANKRD63C9JTQ0 380 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 H7C2Y5 167 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 K7EMT4 169 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 DFFAO00273 331 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 HDAC3O15379 428 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 RAD51CO43502 376 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 AQP8O94778 261 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 PTTG1O95997 202 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 TIMP1P01033 207 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 HOXC4P09017 264 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-204ENST00000412061 SMIM10L1P0DMW3 83 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 LIPCP11150 499 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 GABRG2P18507 467 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 MT3P25713 68 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 MAGEA3P43357 314 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 TSPAN5P62079 268 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 SEMG2Q02383 582 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 FADDQ13158 208 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 DYNC1I2Q13409 638 aaKnown RBP3.51□□□□□ -1.85
BRCA1-204ENST00000412061 CLINT1Q14677 625 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 OR7A5Q15622 319 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 CPTPQ5TA50 214 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 GFI1BQ5VTD9 330 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 KHDRBS2Q5VWX1 349 aaKnown RBP3.51□□□□□ -1.85
BRCA1-204ENST00000412061 C11orf71Q6IPW1 123 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 RWDD4Q6NW29 188 aaKnown RBP3.51□□□□□ -1.85
BRCA1-204ENST00000412061 RALGPS2Q86X27 583 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-204ENST00000412061 C17orf82Q86X59 251 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-204ENST00000412061 TMEM25Q86YD3 366 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 CBLN2Q8IUK8 224 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 C4orf32Q8N8J7 132 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 OR5AR1Q8NGP9 310 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 OR2A1Q8NGT9 310 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 OR10R2Q8NGX6 335 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 FANK1Q8TC84 345 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 PHF10Q8WUB8 498 aaKnown RBP3.51□□□□□ -1.85
BRCA1-204ENST00000412061 DNAJB3Q8WWF6 145 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 PPP1R14BQ96C90 147 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 PIK3IP1Q96FE7 263 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 SMIM10Q96HG1 83 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF597Q96LX8 424 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 HIST1H4GQ99525 98 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 RBBP8Q99708 897 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 FGFBP2Q9BYJ0 223 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 ZBP1Q9H171 429 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 UPF3AQ9H1J1 476 aaKnown RBP3.51□□□□□ -1.85
BRCA1-204ENST00000412061 JPT2Q9H910 190 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 IFT46Q9NQC8 304 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 TREX1Q9NSU2 369 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 NLE1Q9NVX2 485 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-204ENST00000412061 C1orf109Q9NX04 203 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 BTNL2Q9UIR0 455 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 RAD50Q92878 1312 aa3.51□□□□□ -1.85
BRCA1-204ENST00000412061 A0A1B0GU03 582 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 TMEM210A6NLX4 147 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 A8MXK9 166 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 K7N7A8 449 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 GABRPO00591 440 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 IDH3BO43837 385 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 GCGP01275 180 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 MELTFP08582 738 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 KRT7P08729 469 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 OR8U9P0C7N5 309 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 RNF224P0DH78 156 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 GIMD1P0DJR0 217 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 GFAPP14136 432 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 IGFBP3P17936 291 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-204ENST00000412061 RAB5AP20339 215 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 MAGP20916 626 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 HLA-DMAP28067 261 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 AQP1P29972 269 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 PRKAR2BP31323 418 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 GLP1RP43220 463 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 APOC4P55056 127 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 KRTAP10-6P60371 365 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-204ENST00000412061 NUTF2P61970 127 aaKnown RBP3.5□□□□□ -1.85
BRCA1-204ENST00000412061 SELENOTP62341 195 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 TGFBR3Q03167 851 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 ZNHIT3Q15649 155 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-204ENST00000412061 RGS21Q2M5E4 152 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 CCDC14Q49A88 953 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 NHLRC3Q5JS37 347 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 SAPCD1Q5SSQ6 148 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 IDNKQ5T6J7 187 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 LEMD1Q68G75 181 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 WDR74Q6RFH5 385 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-204ENST00000412061 COX15Q7KZN9 410 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 SSX7Q7RTT5 188 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 PRSS41Q7RTY9 318 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 SKA3Q8IX90 412 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 ZFP41Q8N8Y5 198 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 Q8NBF4 154 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 OR8U1Q8NH10 309 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 OR6X1Q8NH79 312 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 OR51E1Q8TCB6 317 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 RNASEH2CQ8TDP1 164 aaKnown RBP3.5□□□□□ -1.85
BRCA1-204ENST00000412061 SDR42E1Q8WUS8 393 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms