RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 UBOX5O94941 541 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 ABHD16AO95870 558 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 CHN2P52757 468 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 SELENOVP59797 346 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 HIST1H3AP68431 136 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 PSG7Q13046 419 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 CCNIQ14094 377 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 RSPO1Q2MKA7 263 aaPredicted RBP16.22■□□□□ 0.19
SF3A1-202ENST00000411423 HIST2H3PS2Q5TEC6 136 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 HIST2H3AQ71DI3 136 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 ZBTB46Q86UZ6 589 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 JAZF1Q86VZ6 243 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 ADGRG5Q8IZF4 528 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 NPEPL1Q8NDH3 523 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 SLC26A10Q8NG04 563 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 OR52E2Q8NGJ4 325 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 ASB9Q96DX5 294 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 THTPAQ9BU02 230 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 NARFLQ9H6Q4 476 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 PLEK2Q9NYT0 353 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 KLHL21Q9UJP4 597 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 NDRG4Q9ULP0 352 aaKnown RBP16.22■□□□□ 0.19
SF3A1-202ENST00000411423 STARD10Q9Y365 291 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 CDH10Q9Y6N8 788 aa16.22■□□□□ 0.19
SF3A1-202ENST00000411423 SPRY3O43610 288 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 CCNB2O95067 398 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 PSKH1P11801 424 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 CRABP1P29762 137 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 GCH1P30793 250 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 IFNGR2P38484 337 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 GPR6P46095 362 aaPredicted RBP16.21■□□□□ 0.19
SF3A1-202ENST00000411423 CENPAP49450 140 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 ZNF81P51508 661 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.21■□□□□ 0.19
SF3A1-202ENST00000411423 OR2T5Q6IEZ7 315 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 TMEM154Q6P9G4 183 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 LYPD4Q6UWN0 246 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 TRPM8Q7Z2W7 1104 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 AQP11Q8NBQ7 271 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 OR2T29Q8NH02 315 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 OR4Q3Q8NH05 313 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 OR1F12Q8NHA8 337 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 CLDND2Q8NHS1 167 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 BCAS4Q8TDM0 211 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 SNX33Q8WV41 574 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 SLC7A6OSQ96CW6 309 aaPredicted RBP16.21■□□□□ 0.19
SF3A1-202ENST00000411423 C1orf159Q96HA4 380 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 MRPL22Q9NWU5 206 aaKnown RBP16.21■□□□□ 0.19
SF3A1-202ENST00000411423 TMEM160Q9NX00 188 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 NKIRAS2Q9NYR9 191 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 GRIP1Q9Y3R0 1128 aa16.21■□□□□ 0.19
SF3A1-202ENST00000411423 RENP00797 406 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 TGFAP01135 160 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 MRPS11P82912 194 aaKnown RBP16.2■□□□□ 0.18
SF3A1-202ENST00000411423 CHRFAM7AQ494W8 412 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 FAM166AQ6J272 317 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 CFAP77Q6ZQR2 320 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 Q6ZR03 302 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 RASSF6Q6ZTQ3 369 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 TMEM179BQ7Z7N9 219 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 LINC00346Q8IVM7 164 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 CYB561A3Q8NBI2 242 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 ELOVL3Q9HB03 270 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 MSL2Q9HCI7 577 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 TBCCD1Q9NVR7 557 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 IL20Q9NYY1 176 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 TREM2Q9NZC2 230 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 GPR160Q9UJ42 338 aa16.2■□□□□ 0.18
SF3A1-202ENST00000411423 FAM157AC9JC47 383 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 SOX14O95416 240 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 ANOS1P23352 680 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 PYCR1P32322 319 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 CRYBB2P43320 205 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 TEKQ02763 1124 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 MICAQ29983 383 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 PCGF3Q3KNV8 242 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 FAM98BQ52LJ0 330 aaKnown RBP16.19■□□□□ 0.18
SF3A1-202ENST00000411423 AVPI1Q5T686 147 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 SLC18B1Q6NT16 456 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 PGM2L1Q6PCE3 622 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 USP51Q70EK9 711 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 NIPSNAP1Q9BPW8 284 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 PNRC2Q9NPJ4 139 aaKnown RBP16.19■□□□□ 0.18
SF3A1-202ENST00000411423 ARMC1Q9NVT9 282 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 KCNS2Q9ULS6 477 aa16.19■□□□□ 0.18
SF3A1-202ENST00000411423 SAMHD1Q9Y3Z3 626 aaKnown RBP16.19■□□□□ 0.18
SF3A1-202ENST00000411423 IGHV1-69-2A0A0G2JMI3 117 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 H3BSA7 217 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 PPIHO43447 177 aaKnown RBP16.18■□□□□ 0.18
SF3A1-202ENST00000411423 IDH3BO43837 385 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 NOS3P29474 1203 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 GGT2P36268 569 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 RPS27P42677 84 aaKnown RBP16.18■□□□□ 0.18
SF3A1-202ENST00000411423 ARHGDIAP52565 204 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 CDH15P55291 814 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 TMEM33P57088 247 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 COX10Q12887 443 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 KRTAP27-1Q3LI81 207 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 DNM1P34Q6PK57 102 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 SLC37A3Q8NCC5 494 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms