RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 OR6K6Q8NGW6 343 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 ABHD4Q8TB40 342 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 SYNPRQ8TBG9 265 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 SNX33Q8WV41 574 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 STMN2Q93045 179 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 C4orf45Q96LM5 186 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 Q96MF0 132 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 PITX2Q99697 317 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 VRK1Q99986 396 aaPredicted RBP9.39□□□□□ -0.91
CHMP3-205ENST00000409810 NMNAT2Q9BZQ4 307 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 TUBG2Q9NRH3 451 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 TBCCD1Q9NVR7 557 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 SLCO1C1Q9NYB5 712 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 GDF2Q9UK05 429 aaPredicted RBP9.39□□□□□ -0.91
CHMP3-205ENST00000409810 OAZ3Q9UMX2 235 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 ORC6Q9Y5N6 252 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 LHFPL6Q9Y693 200 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 ZNF469Q96JG9 3925 aaPredicted RBP9.39□□□□□ -0.91
CHMP3-205ENST00000409810 MAP1AP78559 2803 aaPredicted RBP9.38□□□□□ -0.91
CHMP3-205ENST00000409810 PRODHO43272 600 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 ICMTO60725 284 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 GLCEO94923 617 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 IGHV4-39P01824 125 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 MT-ND5P03915 603 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 GYPBP06028 91 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 CSF3P09919 207 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 GGT2P36268 569 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 RGS6P49758 472 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 ENTPD1P49961 510 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 EFNA4P52798 201 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 DSCR9P59020 149 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 PPP1CBP62140 327 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 HIST1H3AP68431 136 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 ECH1Q13011 328 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 SNAPC1Q16533 368 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 CLEC12BQ2HXU8 276 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 ZNF718Q3SXZ3 478 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 SLC35D3Q5M8T2 416 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 HIST2H3PS2Q5TEC6 136 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 OTPQ5XKR4 325 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 SLC18B1Q6NT16 456 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 CLEC2AQ6UVW9 174 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 HIST2H3AQ71DI3 136 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 LINC00346Q8IVM7 164 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 OR51L1Q8NGJ5 315 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 NEU4Q8WWR8 484 aaPredicted RBP9.38□□□□□ -0.91
CHMP3-205ENST00000409810 DOK1Q99704 481 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 ATF6BQ99941 703 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 SYT3Q9BQG1 590 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 MRPL37Q9BZE1 423 aaKnown RBP9.38□□□□□ -0.91
CHMP3-205ENST00000409810 MS4A5Q9H3V2 200 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 S100A14Q9HCY8 104 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 MYOZ1Q9NP98 299 aaPredicted RBP9.38□□□□□ -0.91
CHMP3-205ENST00000409810 MRPL22Q9NWU5 206 aaKnown RBP9.38□□□□□ -0.91
CHMP3-205ENST00000409810 CYB5R1Q9UHQ9 305 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 DUSP13Q9UII6 198 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 COMMD3-BMI1R4GMX3 469 aa9.38□□□□□ -0.91
CHMP3-205ENST00000409810 IGLV3-9A0A075B6K5 115 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 TVP23AA6NH52 213 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 SAC3D1A6NKF1 404 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 FAM183AA6NL82 134 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 H3BNX3 289 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 SSX4O60224 188 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 SPARCP09486 303 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 CLUP10909 449 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 CD99P14209 185 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 ZNF250P15622 560 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 WNT5AP41221 380 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 RPS7P62081 194 aaKnown RBP9.37□□□□□ -0.91
CHMP3-205ENST00000409810 PPP2R2BQ00005 443 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 PTGES3Q15185 160 aaKnown RBP9.37□□□□□ -0.91
CHMP3-205ENST00000409810 ZSCAN26Q16670 478 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 NKPD1Q17RQ9 610 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 KLHL12Q53G59 568 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 TEX30Q5JUR7 227 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 LINC01590Q5TEZ4 76 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 LCN1P1Q5VSP4 162 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 TMEM236Q5W0B7 351 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 PLBD1Q6P4A8 553 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 CORO6Q6QEF8 472 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 RFPL4BQ6ZWI9 263 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 CXXC5Q7LFL8 322 aaKnown RBP9.37□□□□□ -0.91
CHMP3-205ENST00000409810 SHFQ7M4L6 423 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 ZNF101Q8IZC7 436 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 OR5L1Q8NGL2 311 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 OR6N2Q8NGY6 317 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 SLC25A40Q8TBP6 338 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 SPTSSAQ969W0 71 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 SORCS2Q96PQ0 1159 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 INTS14Q96SY0 518 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 CIB1Q99828 191 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 PKP2Q99959 881 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 OR51V1Q9H2C8 321 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 TVP23BQ9NYZ1 205 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 CGGBP1Q9UFW8 167 aaPredicted RBP9.37□□□□□ -0.91
CHMP3-205ENST00000409810 FZR1Q9UM11 496 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 GRIP1Q9Y3R0 1128 aa9.37□□□□□ -0.91
CHMP3-205ENST00000409810 FLNAP21333 2647 aaKnown RBP9.37□□□□□ -0.91
CHMP3-205ENST00000409810 TMEM129A0AVI4 362 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 ZAR1LA6NP61 321 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms