RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 EDDM3AQ14507 147 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 ZMAT1Q5H9K5 638 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 RPL22L1Q6P5R6 122 aaKnown RBP10.18□□□□□ -0.78
SNX13-202ENST00000409604 GALNT11Q8NCW6 608 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 STK35Q8TDR2 534 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 GABARAPL3Q9BY60 117 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 TAS2R4Q9NYW5 299 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 ENPP5Q9UJA9 477 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 TEX13DA0A0J9YY54 714 aaPredicted RBP10.17□□□□□ -0.78
SNX13-202ENST00000409604 DHFRP00374 187 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 SERPINA5P05154 406 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 NTRK2Q16620 822 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 ABCA11PQ4W5N1 156 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 THEM4Q5T1C6 240 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 MRPL14Q6P1L8 145 aaKnown RBP10.17□□□□□ -0.78
SNX13-202ENST00000409604 PRSS45Q7RTY3 260 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 SYNPRQ8TBG9 265 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 URM1Q9BTM9 101 aaKnown RBP10.17□□□□□ -0.78
SNX13-202ENST00000409604 SLC19A3Q9BZV2 496 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 SLCO5A1Q9H2Y9 848 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 NLKQ9UBE8 527 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 REV1Q9UBZ9 1251 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 TP53TG5Q9Y2B4 290 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 LIPT2A6NK58 231 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 GPX5O75715 221 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 RBBP9O75884 186 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 CNOT4O95628 575 aaKnown RBP10.17□□□□□ -0.78
SNX13-202ENST00000409604 CRYAAP02489 173 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 SMIM18P0DKX4 95 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 ZNF35P13682 527 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 RPS19P39019 145 aaKnown RBP10.17□□□□□ -0.78
SNX13-202ENST00000409604 ZNF121P58317 390 aaPredicted RBP10.17□□□□□ -0.78
SNX13-202ENST00000409604 SNRPGP62308 76 aaKnown RBP10.17□□□□□ -0.78
SNX13-202ENST00000409604 MESTQ5EB52 335 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 SUMF1Q8NBK3 374 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 PRSS27Q9BQR3 290 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 SELENOIQ9C0D9 397 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 GSKIPQ9P0R6 139 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 PCDHGB2Q9Y5G2 931 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 SLC22A23A1A5C7 686 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 AQP8O94778 261 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 TOXO94900 526 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 SCGB1D2O95969 90 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 PLPPR5Q32ZL2 321 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 JMJD6Q6NYC1 403 aaPredicted RBP10.17□□□□□ -0.78
SNX13-202ENST00000409604 PXKQ7Z7A4 578 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 C17orf82Q86X59 251 aaPredicted RBP10.17□□□□□ -0.78
SNX13-202ENST00000409604 FAM131CQ96AQ9 280 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 DUS3LQ96G46 650 aaKnown RBP10.17□□□□□ -0.78
SNX13-202ENST00000409604 ZNF700Q9H0M5 742 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 FKBP14Q9NWM8 211 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 FBXO9Q9UK97 447 aaPredicted RBP10.17□□□□□ -0.78
SNX13-202ENST00000409604 SPEF1Q9Y4P9 236 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 TLN2Q9Y4G6 2542 aa10.17□□□□□ -0.78
SNX13-202ENST00000409604 DVL2O14641 736 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 SEMA7AO75326 666 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 UPK3AO75631 287 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 KNG1P01042 644 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 PTHLHP12272 177 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 AMY2BP19961 511 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 THBS2P35442 1172 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 CD83Q01151 205 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 ZNF169Q14929 603 aaPredicted RBP10.16□□□□□ -0.78
SNX13-202ENST00000409604 SFRP5Q5T4F7 317 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 UNQ6126/PRO20091Q6UXV3 157 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 MS4A3Q96HJ5 214 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 TMEM43Q9BTV4 400 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 TP63Q9H3D4 680 aaPredicted RBP10.16□□□□□ -0.78
SNX13-202ENST00000409604 B3GNT3Q9Y2A9 372 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 PLCE1Q9P212 2302 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 A0A087WZY1 265 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 C5orf51A6NDU8 294 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 PTH2RP49190 550 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 RAC3P60763 192 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 TSPO2Q5TGU0 170 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 ANGPTL5Q86XS5 388 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 ZNF584Q8IVC4 421 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 FAM109AQ8N4B1 249 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 LGALS14Q8TCE9 139 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 TGIF2Q9GZN2 237 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 MMP27Q9H306 513 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 PCDHB10Q9UN67 800 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 CCL21O00585 134 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 GABRA4P48169 554 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 SUMO3P55854 103 aaPredicted RBP10.16□□□□□ -0.78
SNX13-202ENST00000409604 FABP5Q01469 135 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 OCLNQ16625 522 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 PABPC1L2AQ5JQF8 200 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 OR2T2Q6IF00 324 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 NANOGP1Q8N7R0 232 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 C17orf47Q8NEP4 570 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 ZNF420Q8TAQ5 688 aaPredicted RBP10.16□□□□□ -0.78
SNX13-202ENST00000409604 MAFIPQ8WZ33 124 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 DUSP21Q9H596 190 aa10.16□□□□□ -0.78
SNX13-202ENST00000409604 ZNF552Q9H707 407 aaPredicted RBP10.16□□□□□ -0.78
SNX13-202ENST00000409604 PAQR5Q9NXK6 330 aaPredicted RBP10.16□□□□□ -0.78
SNX13-202ENST00000409604 IGKV3D-11A0A0A0MRZ8 115 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 LY6G6EA0A0G2JKS1 128 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 FADS1O60427 444 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 CCNKO75909 580 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms