RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 C9orf170A2RU37 121 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 C5orf51A6NDU8 294 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 COLCA2A8K830 154 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 UBE2CO00762 179 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 OR2T1O43869 369 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 NKX2-2O95096 273 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 IL2RAP01589 272 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 CBR1P16152 277 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 AVPR2P30518 371 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 RHOUQ7L0Q8 258 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 KCTD9Q7L273 389 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 DPY19L4Q7Z388 723 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 CD163Q86VB7 1156 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 SFTPA2Q8IWL1 248 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 CASTOR1Q8WTX7 329 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 PATE1Q8WXA2 126 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 SHDQ96IW2 340 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 SLC41A2Q96JW4 573 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 ARL5BQ96KC2 179 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 CKLFQ9UBR5 152 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 SHPKQ9UHJ6 478 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 TINAGQ9UJW2 476 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 CPED1A4D0V7 1026 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 C5orf52A6NGY3 159 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 TTLL8A6PVC2 850 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 HSPB2A8KAH6 182 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 CELA2BP08218 269 aaPredicted RBP13.9□□□□□ -0.18
LIMS2-205ENST00000409455 CT62P0C5K7 136 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 VAMP1P23763 118 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 ABCD3P28288 659 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 HTR2CP28335 458 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 SDHAP31040 664 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 FAM53BQ14153 422 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 FZD2Q14332 565 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 HSPB2Q16082 182 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 EIF2S3LQ2VIR3 472 aaKnown RBP13.9□□□□□ -0.18
LIMS2-205ENST00000409455 PRRT3Q5FWE3 981 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 RNASE10Q5GAN6 216 aaKnown RBP13.9□□□□□ -0.18
LIMS2-205ENST00000409455 WDR38Q5JTN6 314 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 DRAM2Q6UX65 266 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 ZNF600Q6ZNG1 722 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 RNF44Q7L0R7 432 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 C10orf53Q8N6V4 93 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 EXD3Q8N9H8 876 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 NKX3-1Q99801 234 aaPredicted RBP13.9□□□□□ -0.18
LIMS2-205ENST00000409455 ZMAT3Q9HA38 289 aaKnown RBP13.9□□□□□ -0.18
LIMS2-205ENST00000409455 RHOFQ9HBH0 211 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 ACKR4Q9NPB9 350 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 SLC2A8Q9NY64 477 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 LPAR3Q9UBY5 353 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 FAM96BQ9Y3D0 163 aa13.9□□□□□ -0.18
LIMS2-205ENST00000409455 GPR75O95800 540 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 CRHP06850 196 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 CD14P08571 375 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 PAX6P26367 422 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 RPS27P42677 84 aaKnown RBP13.89□□□□□ -0.19
LIMS2-205ENST00000409455 KIR3DL2P43630 455 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 PPICP45877 212 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 ZNHIT3Q15649 155 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-205ENST00000409455 CDNFQ49AH0 187 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 FCRL6Q6DN72 434 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 FAM166AQ6J272 317 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 C15orf54Q8N8G6 183 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 OR52R1Q8NGF1 315 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 GPBAR1Q8TDU6 330 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 HRH4Q9H3N8 390 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 KLK13Q9UKR3 277 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 ARHGEF17Q96PE2 2063 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-205ENST00000409455 EML5Q05BV3 1969 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 DCTN6O00399 190 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 ICOSLGO75144 302 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 SMIM10L1P0DMW3 83 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 ALOX5APP20292 161 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 S100PP25815 95 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 CTXN1P60606 82 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 ZP2Q05996 745 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 PMPCAQ10713 525 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 ZNF704Q6ZNC4 412 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-205ENST00000409455 ZDHHC22Q8N966 263 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 OR4S1Q8NGB4 309 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 SMIM10Q96HG1 83 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 ZNF587Q96SQ5 575 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-205ENST00000409455 OR51M1Q9H341 326 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 SRMSQ9H3Y6 488 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 GTF2A1LQ9UNN4 478 aa13.89□□□□□ -0.19
LIMS2-205ENST00000409455 C13orf42A0A1B0GVH6 325 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 PHYHO14832 338 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 SFTA3P0C7M3 94 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 APEHP13798 732 aaKnown RBP13.88□□□□□ -0.19
LIMS2-205ENST00000409455 MUC1P15941 1255 aaPredicted RBP13.88□□□□□ -0.19
LIMS2-205ENST00000409455 CAV2P51636 162 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 DMWDQ09019 674 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 C1orf61Q13536 156 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 ALG10Q5BKT4 473 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 GLYATL3Q5SZD4 288 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 FAHD2BQ6P2I3 314 aaPredicted RBP13.88□□□□□ -0.19
LIMS2-205ENST00000409455 ADGRE4PQ86SQ3 457 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 NAA40Q86UY6 237 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 TMEFF1Q8IYR6 380 aa13.88□□□□□ -0.19
LIMS2-205ENST00000409455 SLC22A8Q8TCC7 542 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms