RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 EVX1P49640 407 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 ADAM8P78325 824 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 LINC01590Q5TEZ4 76 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 PLBD1Q6P4A8 553 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 ARL9Q6T311 187 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 KRTAP1-3Q8IUG1 177 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 CPOQ8IVL8 374 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 LINC00346Q8IVM7 164 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 C1orf174Q8IYL3 243 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 ZNF101Q8IZC7 436 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 PQLC1Q8N2U9 271 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 ZNF511Q8NB15 262 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 PRRG3Q9BZD7 231 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 HDHD2Q9H0R4 259 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 WDR76Q9H967 626 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 TVP23BQ9NYZ1 205 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 GDF2Q9UK05 429 aaPredicted RBP17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 COMMD3-BMI1R4GMX3 469 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 ARFGEF3Q5TH69 2177 aa17.08■□□□□ 0.32
PDLIM2-207ENST00000409417 TMEM129A0AVI4 362 aa17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 ZAR1LA6NP61 321 aa17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 ALPLP05186 524 aa17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 PCK2Q16822 640 aa17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 Q5PR19 223 aa17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 ELFN2Q5R3F8 820 aa17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 RGS7BPQ6MZT1 257 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 LYPD4Q6UWN0 246 aa17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 C4orf45Q96LM5 186 aa17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 DOK1Q99704 481 aa17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 GABARAPL3Q9BY60 117 aa17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 MRPL37Q9BZE1 423 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 OR51V1Q9H2C8 321 aa17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 OR51B6Q9H340 312 aa17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 HINT3Q9NQE9 182 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 USE1Q9NZ43 259 aa17.07■□□□□ 0.32
PDLIM2-207ENST00000409417 PRODHO43272 600 aa17.06■□□□□ 0.32
PDLIM2-207ENST00000409417 GLCEO94923 617 aa17.06■□□□□ 0.32
PDLIM2-207ENST00000409417 LCKP06239 509 aa17.06■□□□□ 0.32
PDLIM2-207ENST00000409417 ENTPD1P49961 510 aa17.06■□□□□ 0.32
PDLIM2-207ENST00000409417 ECH1Q13011 328 aa17.06■□□□□ 0.32
PDLIM2-207ENST00000409417 TEX30Q5JUR7 227 aa17.06■□□□□ 0.32
PDLIM2-207ENST00000409417 SLX4IPQ5VYV7 408 aa17.06■□□□□ 0.32
PDLIM2-207ENST00000409417 CFAP77Q6ZQR2 320 aa17.06■□□□□ 0.32
PDLIM2-207ENST00000409417 WFDC11Q8NEX6 87 aa17.06■□□□□ 0.32
PDLIM2-207ENST00000409417 PITX2Q99697 317 aa17.06■□□□□ 0.32
PDLIM2-207ENST00000409417 COQ7Q99807 217 aa17.06■□□□□ 0.32
PDLIM2-207ENST00000409417 ELOVL3Q9HB03 270 aa17.06■□□□□ 0.32
PDLIM2-207ENST00000409417 FLNAP21333 2647 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-207ENST00000409417 ZNF593O00488 134 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 EI24O14681 340 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 NDUFS7O75251 213 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 ABHD16AO95870 558 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 IGHV4-39P01824 125 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 ZNF250P15622 560 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 ERVS71-1P61550 626 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 CXXC5Q7LFL8 322 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 CBR4Q8N4T8 237 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 OR1J1Q8NGS3 322 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 IPCEF1Q8WWN9 437 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 SLC7A6Q92536 515 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 SYT3Q9BQG1 590 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 MARCH7Q9H992 704 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 BARX1Q9HBU1 254 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 TBCCD1Q9NVR7 557 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 DUSP13Q9UII6 198 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 FZR1Q9UM11 496 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 ACANP16112 2415 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 ANKRD65E5RJM6 399 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 NGFP01138 241 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 GSTT1P30711 240 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 POLR2IP36954 125 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 RPS27P42677 84 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 PPOXP50336 477 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 ALDH3A2P51648 485 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 SELENOVP59797 346 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 EFNB1P98172 346 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 KLHL12Q53G59 568 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 C12orf73Q69YU5 71 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 TMEM154Q6P9G4 183 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 RFPL4BQ6ZWI9 263 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 LRP11Q86VZ4 500 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 BBS1Q8NFJ9 593 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 ABHD4Q8TB40 342 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 MAP6Q96JE9 813 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 DCLRE1CQ96SD1 692 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 INTS14Q96SY0 518 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 C9orf16Q9BUW7 83 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 RIBC2Q9H4K1 309 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 PNRC2Q9NPJ4 139 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 GRIP1Q9Y3R0 1128 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 ORC6Q9Y5N6 252 aa17.05■□□□□ 0.32
PDLIM2-207ENST00000409417 VPS13CQ709C8 3753 aa17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 PRKYO43930 277 aa17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 BAG2O95816 211 aa17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 DBHP09172 617 aa17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 SPARCP09486 303 aa17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 SLC2A5P22732 501 aa17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 KLF3P57682 345 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 PPP1CBP62140 327 aa17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 RSPO1Q2MKA7 263 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms