RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 PHF19Q5T6S3 580 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 ARHGAP11AQ6P4F7 1023 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 PRSS54Q6PEW0 395 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 UNQ6126/PRO20091Q6UXV3 157 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 NRROSQ86YC3 692 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 HIST3H2BBQ8N257 126 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 OR5T3Q8NGG3 340 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 OR4C6Q8NH72 309 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 ZNF417Q8TAU3 575 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 GPR148Q8TDV2 347 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 FBXO17Q96EF6 278 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 MRGPRX3Q96LB0 322 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 CNN2Q99439 309 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 MCHR1Q99705 422 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 PRSS27Q9BQR3 290 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 PIGQQ9BRB3 760 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 SCRT1Q9BWW7 348 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 GPR61Q9BZJ8 451 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 HRH4Q9H3N8 390 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 PTGES2Q9H7Z7 377 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 DOK5Q9P104 306 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 CDV3Q9UKY7 258 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 HDGFL3Q9Y3E1 203 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 ATG4BQ9Y4P1 393 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 DOCK9Q9BZ29 2069 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 IGF2RP11717 2491 aa9.59□□□□□ -0.87
NIF3L1-204ENST00000409357 A0A0A6YYC8 382 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 MED19A0JLT2 244 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 TSPAN11A1L157 253 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 CPED1A4D0V7 1026 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 OR5H15A6NDH6 313 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 OR5H1A6NKK0 313 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 CPSF4LA6NMK7 179 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF587BE7ETH6 402 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 I3L1I5 382 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 CDC40O60508 579 aaKnown RBP eCLIP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 GLCEO94923 617 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 AGR2O95994 175 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 FGF7P21781 194 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ADH6P28332 368 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 CD80P33681 288 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 IGFALSP35858 605 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 TAS2R31P59538 309 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 STXBP1P61764 594 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 FAM3AP98173 230 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 TGM3Q08188 693 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 GAMTQ14353 236 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ISXQ2M1V0 245 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 TP53I3Q53FA7 332 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF684Q5T5D7 378 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 KHDRBS2Q5VWX1 349 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 PAPD4Q6PIY7 484 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SPNS3Q6ZMD2 512 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF595Q8IYB9 648 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 CDK20Q8IZL9 346 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 CARFQ8N187 725 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 LRRC18Q8N456 261 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF610Q8N9Z0 462 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 HSD17B11Q8NBQ5 300 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 TERB2Q8NHR7 220 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 WFIKKN2Q8TEU8 576 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SNX33Q8WV41 574 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ALG14Q96F25 216 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 AMDHD1Q96NU7 426 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 LGR4Q9BXB1 951 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SELENOIQ9C0D9 397 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ACTR3CQ9C0K3 210 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 NRSN2Q9GZP1 204 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 MED20Q9H944 212 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 FN3KRPQ9HA64 309 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 USP36Q9P275 1121 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 TRPC4Q9UBN4 977 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SIGLEC7Q9Y286 467 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SLCO1B1Q9Y6L6 691 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 LAMA5O15230 3695 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 TMEM269A0A1B0GVZ9 245 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 hCG_1809904A0A1W2PP81 198 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 A0A1W2PPK0 400 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 A0A1W2PR64 198 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 A0A1W2PRV1 198 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 C9JQL5 133 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 PPP1R2P9O14990 202 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 TOX3O15405 576 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ADAP1O75689 374 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 YIF1AO95070 293 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 MBP02144 154 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 THBS1P07996 1170 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 METTL15P1P0C7V9 234 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 TBPP20226 339 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 LMO1P25800 156 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 MSX1P28360 303 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SERPINA4P29622 427 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 LPAR6P43657 344 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SPINT3P49223 89 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ARRB1P49407 418 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 DIO1P49895 249 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SUCLG1P53597 346 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 CASP6P55212 293 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 TAS2R38P59533 333 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 TBPL1P62380 186 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms