RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 SPIN2BQ9BPZ2 258 aa3.49□□□□□ -1.85
PTPN12-202ENST00000407343 GEMIN7Q9H840 131 aaKnown RBP3.49□□□□□ -1.85
PTPN12-202ENST00000407343 WFDC1Q9HC57 220 aa3.49□□□□□ -1.85
PTPN12-202ENST00000407343 RETNQ9HD89 108 aa3.49□□□□□ -1.85
PTPN12-202ENST00000407343 ZDHHC4Q9NPG8 344 aa3.49□□□□□ -1.85
PTPN12-202ENST00000407343 DUX4Q9UBX2 424 aa3.49□□□□□ -1.85
PTPN12-202ENST00000407343 TMEM14AQ9Y6G1 99 aa3.49□□□□□ -1.85
PTPN12-202ENST00000407343 TMEM150BA6NC51 233 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 SOCS1O15524 211 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 CDH16O75309 829 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 YIF1AO95070 293 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 LINC00869P0C866 280 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 GGT1P19440 569 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 OR1E1P30953 314 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 KIR3DL2P43630 455 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 SF3A2Q15428 464 aaKnown RBP3.48□□□□□ -1.85
PTPN12-202ENST00000407343 XKR4Q5GH76 650 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 GPR107Q5VW38 600 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 NPSR1Q6W5P4 371 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 ZNF709Q8N972 641 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 PIFOQ8TCI5 191 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 DNAJC1Q96KC8 554 aaKnown RBP3.48□□□□□ -1.85
PTPN12-202ENST00000407343 SCRT1Q9BWW7 348 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 RSPO3Q9BXY4 272 aaPredicted RBP3.48□□□□□ -1.85
PTPN12-202ENST00000407343 FAM192AQ9GZU8 254 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 ZNF835Q9Y2P0 537 aa3.48□□□□□ -1.85
PTPN12-202ENST00000407343 PTPRTO14522 1441 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 L7N2F9 121 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 LSM1O15116 133 aaKnown RBP3.47□□□□□ -1.85
PTPN12-202ENST00000407343 RBFOX2O43251 390 aaKnown RBP eCLIP3.47□□□□□ -1.85
PTPN12-202ENST00000407343 FLOT1O75955 427 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 ARG1P05089 322 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 EIF4EP06730 217 aaKnown RBP3.47□□□□□ -1.85
PTPN12-202ENST00000407343 CTSLP07711 333 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 BCKDHBP21953 392 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 SSTR5P35346 364 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 C21orf59P57076 290 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 TRAM2Q15035 370 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 SPANXN2Q5MJ10 180 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 AVPI1Q5T686 147 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 CMC1Q7Z7K0 106 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 PQLC3Q8N755 202 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 OR6N1Q8NGY5 312 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 OR8U1Q8NH10 309 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 OR5K2Q8NHB8 316 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 LYPD6BQ8NI32 183 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 NTAN1Q96AB6 310 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 C8orf44Q96CB5 159 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 NARS2Q96I59 477 aaKnown RBP3.47□□□□□ -1.85
PTPN12-202ENST00000407343 MICU1Q9BPX6 476 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 SAMSN1Q9NSI8 373 aaKnown RBP3.47□□□□□ -1.85
PTPN12-202ENST00000407343 RAB20Q9NX57 234 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 PTTG3PQ9NZH4 202 aa3.47□□□□□ -1.85
PTPN12-202ENST00000407343 A0A075B6Q4 140 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 H7C417 338 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 BET1O15155 118 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 RAD51BO15315 384 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 OXTP01178 125 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 ZNF286BP0CG31 522 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 WARSP23381 471 aaKnown RBP3.46□□□□□ -1.86
PTPN12-202ENST00000407343 PRRX1P54821 245 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 EIF3EP60228 445 aaKnown RBP3.46□□□□□ -1.86
PTPN12-202ENST00000407343 ILKQ13418 452 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 QPRTQ15274 297 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 LY6EQ16553 131 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 ORMDL2Q53FV1 153 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 FAM78AQ5JUQ0 283 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 FBXW9Q5XUX1 488 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 METTL13Q8N6R0 699 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 MCUR1Q96AQ8 359 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 EEF1AKMT3Q96AZ1 226 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 RBMXL1Q96E39 390 aaKnown RBP3.46□□□□□ -1.86
PTPN12-202ENST00000407343 LZTS2Q9BRK4 669 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 GCNT4Q9P109 453 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 CTSFQ9UBX1 484 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 MTFP1Q9UDX5 166 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 TUBGCP6Q96RT7 1819 aa3.46□□□□□ -1.86
PTPN12-202ENST00000407343 IGKV1-8A0A0C4DH67 115 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 DNASE2O00115 360 aaPredicted RBP3.45□□□□□ -1.86
PTPN12-202ENST00000407343 BPY2O14599 106 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 RAD51CO43502 376 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 HUS1O60921 280 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 CD160O95971 181 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 MYL2P10916 166 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 U2AF2P26368 475 aaKnown RBP eCLIP3.45□□□□□ -1.86
PTPN12-202ENST00000407343 STOMP27105 288 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 MRPL19P49406 292 aaKnown RBP3.45□□□□□ -1.86
PTPN12-202ENST00000407343 RGS8P57771 180 aaPredicted RBP3.45□□□□□ -1.86
PTPN12-202ENST00000407343 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 UBE2NP61088 152 aaKnown RBP3.45□□□□□ -1.86
PTPN12-202ENST00000407343 PPP1CBP62140 327 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 SEMG2Q02383 582 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 RCN1Q15293 331 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 SAXO2Q658L1 398 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 CDKL3Q8IVW4 592 aaPredicted RBP3.45□□□□□ -1.86
PTPN12-202ENST00000407343 ZNF561Q8N587 486 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 OR52E2Q8NGJ4 325 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 COQ8AQ8NI60 647 aa3.45□□□□□ -1.86
PTPN12-202ENST00000407343 SYNPRQ8TBG9 265 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms