RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 ERVS71-1P61550 626 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 HIST1H3AP68431 136 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 ADAM8P78325 824 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 HIST2H3PS2Q5TEC6 136 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 LINC01590Q5TEZ4 76 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 SLC18B1Q6NT16 456 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 TMEM154Q6P9G4 183 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 CFAP77Q6ZQR2 320 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 HIST2H3AQ71DI3 136 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 ZNF101Q8IZC7 436 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 PQLC1Q8N2U9 271 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 OR2AJ1Q8NGZ0 328 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 STMN2Q93045 179 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 TRMT61AQ96FX7 289 aaKnown RBP12.55□□□□□ -0.4
CDPF1-203ENST00000404583 MRPL37Q9BZE1 423 aaKnown RBP12.55□□□□□ -0.4
CDPF1-203ENST00000404583 PLK3Q9H4B4 646 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 GDF2Q9UK05 429 aaPredicted RBP12.55□□□□□ -0.4
CDPF1-203ENST00000404583 NDRG4Q9ULP0 352 aaKnown RBP12.55□□□□□ -0.4
CDPF1-203ENST00000404583 COMMD3-BMI1R4GMX3 469 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 ITPR3Q14573 2671 aa12.55□□□□□ -0.4
CDPF1-203ENST00000404583 OR6C6A6NF89 314 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 EI24O14681 340 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 GLCEO94923 617 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 DBHP09172 617 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 RPS23P62266 143 aaKnown RBP12.54□□□□□ -0.4
CDPF1-203ENST00000404583 RAB35Q15286 201 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 EFNB3Q15768 340 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 KLHL12Q53G59 568 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 ELFN2Q5R3F8 820 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 SLX4IPQ5VYV7 408 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 RGS7BPQ6MZT1 257 aaPredicted RBP12.54□□□□□ -0.4
CDPF1-203ENST00000404583 LRP11Q86VZ4 500 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 KRTAP1-3Q8IUG1 177 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 CBR4Q8N4T8 237 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 BBS1Q8NFJ9 593 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 OR1J1Q8NGS3 322 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 OR1F12Q8NHA8 337 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 MRPL24Q96A35 216 aaKnown RBP12.54□□□□□ -0.4
CDPF1-203ENST00000404583 SYT3Q9BQG1 590 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 BCL2L14Q9BZR8 327 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 RIBC2Q9H4K1 309 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 EIF3KQ9UBQ5 218 aaKnown RBP12.54□□□□□ -0.4
CDPF1-203ENST00000404583 ENOPH1Q9UHY7 261 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 GRIP1Q9Y3R0 1128 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 PMF1-BGLAPU3KQ54 211 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 H0YHG0 523 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 M0R129 80 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 ZNF593O00488 134 aaPredicted RBP12.54□□□□□ -0.4
CDPF1-203ENST00000404583 PRKYO43930 277 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 NGFP01138 241 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 ALPLP05186 524 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 ENTPD1P49961 510 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 SNRPD2P62316 118 aaKnown RBP12.54□□□□□ -0.4
CDPF1-203ENST00000404583 C12orf73Q69YU5 71 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 CXXC5Q7LFL8 322 aaKnown RBP12.54□□□□□ -0.4
CDPF1-203ENST00000404583 ZMYND19Q96E35 227 aaPredicted RBP12.54□□□□□ -0.4
CDPF1-203ENST00000404583 MAP6Q96JE9 813 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 C4orf45Q96LM5 186 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 PITX2Q99697 317 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 DOK1Q99704 481 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 GABARAPL3Q9BY60 117 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 USE1Q9NZ43 259 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 DUSP13Q9UII6 198 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 KCNG2Q9UJ96 466 aa12.54□□□□□ -0.4
CDPF1-203ENST00000404583 RRP15Q9Y3B9 282 aaKnown RBP12.54□□□□□ -0.4
CDPF1-203ENST00000404583 CHD3Q12873 2000 aaKnown RBP12.53□□□□□ -0.4
CDPF1-203ENST00000404583 TLX2O43763 284 aaPredicted RBP12.53□□□□□ -0.4
CDPF1-203ENST00000404583 ABHD16AO95870 558 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 CLPTM1O96005 669 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 IGHV4-39P01824 125 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 SPARCP09486 303 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 BMP4P12644 408 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 GSTT1P30711 240 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 ALDH3A2P51648 485 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 BLVRAP53004 296 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 RSPO1Q2MKA7 263 aaPredicted RBP12.53□□□□□ -0.4
CDPF1-203ENST00000404583 TEX30Q5JUR7 227 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 Q5PR19 223 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 SPATA46Q5T0L3 261 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 SHEQ5VZ18 495 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 SPNS3Q6ZMD2 512 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 RFPL4BQ6ZWI9 263 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 ERI1Q8IV48 349 aaKnown RBP12.53□□□□□ -0.4
CDPF1-203ENST00000404583 ZCCHC24Q8N2G6 241 aaKnown RBP12.53□□□□□ -0.4
CDPF1-203ENST00000404583 TCEANCQ8N8B7 351 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 WFDC11Q8NEX6 87 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 ABHD4Q8TB40 342 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 COQ7Q99807 217 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 SLC29A1Q99808 456 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 C9orf16Q9BUW7 83 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 HDHD2Q9H0R4 259 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 ELOVL3Q9HB03 270 aa12.53□□□□□ -0.4
CDPF1-203ENST00000404583 PNRC2Q9NPJ4 139 aaKnown RBP12.53□□□□□ -0.4
CDPF1-203ENST00000404583 MYEF2Q9P2K5 600 aaKnown RBP12.53□□□□□ -0.4
CDPF1-203ENST00000404583 H7C417 338 aa12.52□□□□□ -0.41
CDPF1-203ENST00000404583 PRODHO43272 600 aa12.52□□□□□ -0.41
CDPF1-203ENST00000404583 ZNF250P15622 560 aa12.52□□□□□ -0.41
CDPF1-203ENST00000404583 SLC2A5P22732 501 aa12.52□□□□□ -0.41
CDPF1-203ENST00000404583 EVX1P49640 407 aa12.52□□□□□ -0.41
CDPF1-203ENST00000404583 RPS7P62081 194 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms