RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 ZDHHC8Q9ULC8 765 aa13.03□□□□□ -0.32
TPM1-207ENST00000403994 COA3Q9Y2R0 106 aaPredicted RBP13.03□□□□□ -0.32
TPM1-207ENST00000403994 POLR1DQ9Y2S0 133 aa13.03□□□□□ -0.32
TPM1-207ENST00000403994 DYSFO75923 2080 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 DCTN6O00399 190 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 TCF21O43680 179 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 GADD45GO95257 159 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 GPANK1O95872 356 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 PNPP00491 289 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 FPR3P25089 353 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 CDKN2AP42771 156 aaKnown RBP13.02□□□□□ -0.33
TPM1-207ENST00000403994 SHQ1Q6PI26 577 aaKnown RBP13.02□□□□□ -0.33
TPM1-207ENST00000403994 ZER1Q7Z7L7 766 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 CCL17Q92583 94 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 PYURFQ96I23 114 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 NSMCE2Q96MF7 247 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 TSSK2Q96PF2 358 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 DIRC2Q96SL1 478 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 OR52D1Q9H346 318 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 METTL17Q9H7H0 456 aaPredicted RBP13.02□□□□□ -0.33
TPM1-207ENST00000403994 G6PC2Q9NQR9 355 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 ARL8BQ9NVJ2 186 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 CD300AQ9UGN4 299 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 KLHL21Q9UJP4 597 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 PURGQ9UJV8 347 aaKnown RBP13.02□□□□□ -0.33
TPM1-207ENST00000403994 LHFPL6Q9Y693 200 aa13.02□□□□□ -0.33
TPM1-207ENST00000403994 IGLV1-36A0A0B4J1U3 117 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 RER1O15258 196 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 FABP3P05413 133 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 KITLGP21583 273 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 MSX2P35548 267 aaPredicted RBP13.01□□□□□ -0.33
TPM1-207ENST00000403994 ERFP50548 548 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 GYS2P54840 703 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 SMIM11AP58511 58 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 TNFAIP6P98066 277 aaPredicted RBP13.01□□□□□ -0.33
TPM1-207ENST00000403994 KCNMB1Q16558 191 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 MEP1BQ16820 701 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 CCDC92Q53HC0 331 aaPredicted RBP13.01□□□□□ -0.33
TPM1-207ENST00000403994 ACSM5Q6NUN0 579 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 DNM1P34Q6PK57 102 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 Q6ZR03 302 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 ZNF771Q7L3S4 317 aaPredicted RBP13.01□□□□□ -0.33
TPM1-207ENST00000403994 OR1F12Q8NHA8 337 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 RAB1CQ92928 201 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 ERMAPQ96PL5 475 aaPredicted RBP13.01□□□□□ -0.33
TPM1-207ENST00000403994 GAL3ST1Q99999 423 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 DCAF16Q9NXF7 216 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 TAGLN3Q9UI15 199 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 STARD10Q9Y365 291 aa13.01□□□□□ -0.33
TPM1-207ENST00000403994 ISPDA4D126 451 aa13□□□□□ -0.33
TPM1-207ENST00000403994 J3QW42 95 aa13□□□□□ -0.33
TPM1-207ENST00000403994 PLPP2O43688 288 aa13□□□□□ -0.33
TPM1-207ENST00000403994 OR10H3O60404 316 aa13□□□□□ -0.33
TPM1-207ENST00000403994 DBHP09172 617 aa13□□□□□ -0.33
TPM1-207ENST00000403994 TUBG1P23258 451 aa13□□□□□ -0.33
TPM1-207ENST00000403994 CRABP1P29762 137 aa13□□□□□ -0.33
TPM1-207ENST00000403994 RRM2P31350 389 aa13□□□□□ -0.33
TPM1-207ENST00000403994 SLC6A6P31641 620 aa13□□□□□ -0.33
TPM1-207ENST00000403994 GNGT1P63211 74 aa13□□□□□ -0.33
TPM1-207ENST00000403994 SLC3A1Q07837 685 aa13□□□□□ -0.33
TPM1-207ENST00000403994 DBPQ10586 325 aaPredicted RBP13□□□□□ -0.33
TPM1-207ENST00000403994 CDK5R2Q13319 367 aa13□□□□□ -0.33
TPM1-207ENST00000403994 LIPNQ5VXI9 398 aa13□□□□□ -0.33
TPM1-207ENST00000403994 C1orf94Q6P1W5 598 aa13□□□□□ -0.33
TPM1-207ENST00000403994 LEG1Q6P5S2 330 aa13□□□□□ -0.33
TPM1-207ENST00000403994 PGM2L1Q6PCE3 622 aa13□□□□□ -0.33
TPM1-207ENST00000403994 ZNF620Q6ZNG0 422 aa13□□□□□ -0.33
TPM1-207ENST00000403994 ZSCAN2Q7Z7L9 614 aaPredicted RBP13□□□□□ -0.33
TPM1-207ENST00000403994 JAZF1Q86VZ6 243 aa13□□□□□ -0.33
TPM1-207ENST00000403994 MCUR1Q96AQ8 359 aa13□□□□□ -0.33
TPM1-207ENST00000403994 CDRT15Q96T59 188 aa13□□□□□ -0.33
TPM1-207ENST00000403994 NMNAT3Q96T66 252 aa13□□□□□ -0.33
TPM1-207ENST00000403994 HDHD2Q9H0R4 259 aa13□□□□□ -0.33
TPM1-207ENST00000403994 TUBG2Q9NRH3 451 aa13□□□□□ -0.33
TPM1-207ENST00000403994 ARL2BPQ9Y2Y0 163 aa13□□□□□ -0.33
TPM1-207ENST00000403994 ARHGAP32A7KAX9 2087 aa13□□□□□ -0.33
TPM1-207ENST00000403994 A0A0G2JMP0 313 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 A0A0X1KG70 313 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 ARPC3O15145 178 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 IGHV2-70P01814 119 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 ANPEPP15144 967 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 HIST1H1CP16403 213 aaKnown RBP12.99□□□□□ -0.33
TPM1-207ENST00000403994 RBMXP38159 391 aaKnown RBP12.99□□□□□ -0.33
TPM1-207ENST00000403994 GSSP48637 474 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 RGS6P49758 472 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 HIST1H3AP68431 136 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 COX10Q12887 443 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 RFX4Q33E94 735 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 HIST2H3PS2Q5TEC6 136 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 FAHD2BQ6P2I3 314 aaPredicted RBP12.99□□□□□ -0.33
TPM1-207ENST00000403994 C16orf89Q6UX73 402 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 C1orf229Q6ZS94 237 aaPredicted RBP12.99□□□□□ -0.33
TPM1-207ENST00000403994 HIST2H3AQ71DI3 136 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 DEFB107AQ8IZN7 70 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 SEMA6DQ8NFY4 1073 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 SLC26A10Q8NG04 563 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 OR2Z1Q8NG97 314 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 OR4M2Q8NGB6 313 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 CMBLQ96DG6 245 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 FAHD2AQ96GK7 314 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms