RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 POM121L1PQ3SYA9 428 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 C4orf17Q53FE4 359 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 VRK2Q86Y07 508 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 THNSL2Q86YJ6 484 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 TMEM130Q8N3G9 435 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 FAM160A2Q8N612 972 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-203ENST00000400060 PBX4Q9BYU1 374 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 SRA1Q9HD15 236 aaKnown RBP9.11□□□□□ -0.95
PTPRM-203ENST00000400060 DNAJC25-GNG10A0A024R161 153 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 A0A1B0GTL3 188 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 SLC5A10A0PJK1 596 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 RBFOX3A6NFN3 312 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 C17orf112F2Z3M2 114 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 NDUFS6O75380 124 aaKnown RBP9.11□□□□□ -0.95
PTPRM-203ENST00000400060 RBMXL2O75526 392 aaKnown RBP9.11□□□□□ -0.95
PTPRM-203ENST00000400060 IGHV2-70P01814 119 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 CD14P08571 375 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 GSTP1P09211 210 aaKnown RBP9.11□□□□□ -0.95
PTPRM-203ENST00000400060 CD1CP29017 333 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 CTHP32929 405 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 THBS4P35443 961 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 MLC1Q15049 377 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 SLCO4C1Q6ZQN7 724 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 NEIL2Q969S2 332 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 MCHR2Q969V1 340 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 ARHGDIGQ99819 225 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 UTP23Q9BRU9 249 aaKnown RBP9.11□□□□□ -0.95
PTPRM-203ENST00000400060 MOB1AQ9H8S9 216 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 SLC7A11Q9UPY5 501 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 DTX4Q9Y2E6 619 aa9.11□□□□□ -0.95
PTPRM-203ENST00000400060 DCDC2BA2VCK2 349 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 TSPAN6O43657 245 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 ICOSLGO75144 302 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 HTR5AP47898 357 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 CTXN1P60606 82 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 TMEM91Q6ZNR0 172 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 C19orf35Q6ZS72 473 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 ARIH2OSQ8N7S6 290 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 OR6X1Q8NH79 312 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 OR1E3Q8WZA6 343 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 ISOC2Q96AB3 205 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 BMFQ96LC9 184 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 ZNF2Q9BSG1 426 aaPredicted RBP9.1□□□□□ -0.95
PTPRM-203ENST00000400060 OR14J1Q9UGF5 321 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 LRP5LA4QPB2 252 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 VEGFDO43915 354 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 BMP5P22003 454 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 FAM3BP58499 235 aaPredicted RBP9.1□□□□□ -0.95
PTPRM-203ENST00000400060 DEFB115Q30KQ5 88 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 BTNL8Q6UX41 500 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 APCDD1Q8J025 514 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 PGBD5Q8N414 524 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 C11orf42Q8N5U0 333 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 NUBPLQ8TB37 319 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 DCBLD2Q96PD2 775 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 GKN1Q9NS71 199 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 DOK5Q9P104 306 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 ITGB4P16144 1822 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 A0A0U1RQS6 177 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 A0A1W2PPE2 198 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 MPIG6BO95866 241 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 AGAP20933 346 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 SPINT3P49223 89 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 THBS3P49746 956 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 ERVFC1-1P60608 527 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 COX19Q49B96 90 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 CST9LP1Q5W188 147 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 SLC8B1Q6J4K2 584 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 RD3Q7Z3Z2 195 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 SLC35E3Q7Z769 313 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 CTU1Q7Z7A3 348 aaKnown RBP9.1□□□□□ -0.95
PTPRM-203ENST00000400060 LRRTM4Q86VH4 590 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 ETFBKMTQ8IXQ9 262 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 OIT3Q8WWZ8 545 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 LRRC3BQ96PB8 259 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 OR5V1Q9UGF6 321 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 ABCA3Q99758 1704 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 SEMA7AO75326 666 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 NSA2O95478 260 aaKnown RBP9.1□□□□□ -0.95
PTPRM-203ENST00000400060 GPANK1O95872 356 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 ARG1P05089 322 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 GP1BBP13224 206 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 PFN3P60673 137 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 ACTR1AP61163 376 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 C22orf39Q6P5X5 142 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 TMEM104Q8NE00 496 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 OR1P1Q8NH06 330 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 ADAT1Q9BUB4 502 aaKnown RBP9.1□□□□□ -0.95
PTPRM-203ENST00000400060 ANGPTL4Q9BY76 406 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 SLC39A9Q9NUM3 307 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 OR5AC2Q9NZP5 309 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 AMDHD2Q9Y303 409 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 PCDHGA1Q9Y5H4 931 aa9.1□□□□□ -0.95
PTPRM-203ENST00000400060 TRAV27A0A087WT01 109 aa9.09□□□□□ -0.95
PTPRM-203ENST00000400060 A0A087WWC5 75 aa9.09□□□□□ -0.95
PTPRM-203ENST00000400060 CTSAP10619 480 aa9.09□□□□□ -0.95
PTPRM-203ENST00000400060 CD200P41217 278 aa9.09□□□□□ -0.95
PTPRM-203ENST00000400060 IL13RA2Q14627 380 aa9.09□□□□□ -0.95
PTPRM-203ENST00000400060 EMC4Q5J8M3 183 aa9.09□□□□□ -0.95
PTPRM-203ENST00000400060 MAMSTRQ6ZN01 415 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms