RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 DUSP23Q9BVJ7 150 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 DCSTAMPQ9H295 470 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 PHPT1Q9NRX4 125 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 STARD5Q9NSY2 213 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 OPN4Q9UHM6 478 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 PLXNB3Q9ULL4 1909 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 RTTNQ86VV8 2226 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 ASPMQ8IZT6 3477 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 M0R082 166 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 KPNA4O00629 521 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 ERI3O43414 337 aaKnown RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 GADD45GO95257 159 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 IL18BPO95998 194 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SLC2A1P11166 492 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 ZNF30P17039 623 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 HLA-GP17693 338 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 CERS1P27544 350 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 CCKBRP32239 447 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 DUSP3P51452 185 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 ATP1B3P54709 279 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 RBX1P62877 108 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 CCL7P80098 99 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 PTGES3Q15185 160 aaKnown RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 DUSP6Q16828 381 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 RBM48Q5RL73 367 aaKnown RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 CCNJQ5T5M9 372 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 CYB5R2Q6BCY4 276 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 DPY19L4Q7Z388 723 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 P4HA3Q7Z4N8 544 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 C17orf64Q86WR6 236 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 POC1AQ8NBT0 407 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SLC38A9Q8NBW4 561 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 GPR32P1Q8NGA4 272 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 OR2AJ1Q8NGZ0 328 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 OR52I2Q8NH67 350 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 MCFD2Q8NI22 146 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 HPS1Q92902 700 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 MYDGFQ969H8 173 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 BORCS5Q969J3 196 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 C10orf35Q96D05 121 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 ZNF385AQ96PM9 386 aaKnown RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 APOL4Q9BPW4 351 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 AICDAQ9GZX7 198 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 NMNAT1Q9HAN9 279 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 ABCB9Q9NP78 766 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 ZNF226Q9NYT6 803 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 TVP23BQ9NYZ1 205 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 TRBV7-9A0A0J9YWB2 115 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 ENTPD6O75354 484 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 TCRBP04435 133 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 PVRP15151 417 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 FCARP24071 287 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 AVPR1BP47901 424 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 COMPP49747 757 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SELENOWP63302 87 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 DLX2Q07687 328 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 HIST2H2AA3Q6FI13 130 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 ZNF793Q6ZN11 406 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SLC34A3Q8N130 599 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 DEFB119Q8N690 84 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 TCEANCQ8N8B7 351 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 OR52E5Q8NH55 327 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 TSACCQ96A04 125 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 ZNF300Q96RE9 604 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SLA2Q9H6Q3 261 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 SMPXQ9UHP9 88 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 GSTK1Q9Y2Q3 226 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 TPRKBQ9Y3C4 175 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 NCOR1O75376 2440 aa5.53□□□□□ -1.52
TRAPPC13-202ENST00000399438 KBTBD11-OT1A0A1B0GTJ5 212 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZC3H12DA2A288 527 aaKnown RBP5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 A6NIN4 97 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 SLC35G4P0C7Q5 338 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 GLI4P10075 376 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 EIF2B2P49770 351 aaKnown RBP5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 NCBP2P52298 156 aaKnown RBP eCLIP5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 TAS2R38P59533 333 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 EXOSC2Q13868 293 aaKnown RBP5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 MLF2Q15773 248 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 NNATQ16517 81 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 ARMCX4Q5H9R4 360 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 TPRG1LQ5T0D9 272 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 ULK3Q6PHR2 472 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 C5orf46Q6UWT4 87 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 Q6ZNX1 250 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 USP43Q70EL4 1123 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 FCRLAQ7L513 359 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 C6orf120Q7Z4R8 191 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 MYPOPQ86VE0 399 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 TERB1Q8NA31 727 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 FGF14Q92915 247 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 HSPA12BQ96MM6 686 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 CDCA3Q99618 268 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 ALX4Q9H161 411 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 EGLN3Q9H6Z9 239 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 PLEKHA1Q9HB21 404 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 CDH20Q9HBT6 801 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 LHX9Q9NQ69 397 aa5.52□□□□□ -1.53
TRAPPC13-202ENST00000399438 C1GALT1Q9NS00 363 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms