RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ESRP2Q9H6T0 727 aaKnown RBP10.74□□□□□ -0.69
HLA-DQB1-203ENST00000399082 PLEKHF2Q9H8W4 249 aa10.74□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ADGRL4Q9HBW9 690 aa10.74□□□□□ -0.69
HLA-DQB1-203ENST00000399082 HAO2Q9NYQ3 351 aa10.74□□□□□ -0.69
HLA-DQB1-203ENST00000399082 COPS3Q9UNS2 423 aa10.74□□□□□ -0.69
HLA-DQB1-203ENST00000399082 RNF115Q9Y4L5 304 aa10.74□□□□□ -0.69
HLA-DQB1-203ENST00000399082 LRBAP50851 2863 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 SLC22A31A6NKX4 558 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 APOL3O95236 402 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 DBHP09172 617 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 COX5BP10606 129 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ZNF823P16415 610 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 VHLP40337 213 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 WNT5AP41221 380 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 NUDT6P53370 316 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 NKX6-1P78426 367 aaPredicted RBP10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ZNF91Q05481 1191 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 RAB35Q15286 201 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 SMN1Q16637 294 aaKnown RBP10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 MSMPQ1L6U9 139 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ELFN2Q5R3F8 820 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 SHFQ7M4L6 423 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 SLC16A9Q7RTY1 509 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 DCXRQ7Z4W1 244 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 SLC30A7Q8NEW0 376 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 GJC3Q8NFK1 279 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 CNIH3Q8TBE1 160 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ABHD6Q9BV23 337 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 CLEC4MQ9H2X3 399 aaPredicted RBP10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 PLEK2Q9NYT0 353 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 WARS2Q9UGM6 360 aaKnown RBP10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 FBXL3Q9UKT7 428 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ABCA12Q86UK0 2595 aa10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 FLNBO75369 2602 aaKnown RBP10.73□□□□□ -0.69
HLA-DQB1-203ENST00000399082 TACC2O95359 2948 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 IQCMA0A1B0GVH7 501 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 E7EQL1 145 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 SBK2P0C263 348 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ALOX5APP20292 161 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 STOMP27105 288 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 SSTR2P30874 369 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 OTX1P32242 354 aaPredicted RBP10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 HTR5AP47898 357 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 IL5RAQ01344 420 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 PLP2Q04941 152 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 IL18R1Q13478 541 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ZNF672Q499Z4 452 aaPredicted RBP10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 LCN1P1Q5VSP4 162 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 MEDAGQ5VYS4 303 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 TMEM154Q6P9G4 183 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 TMEM200AQ86VY9 491 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ZNF101Q8IZC7 436 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 OR1F12Q8NHA8 337 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 OTOSQ8NHW6 89 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 NRGNQ92686 78 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 SLAMF6Q96DU3 332 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 CNN2Q99439 309 aaKnown RBP10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 COQ7Q99807 217 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 APOL4Q9BPW4 351 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 YIPF3Q9GZM5 350 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 HDHD2Q9H0R4 259 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 DDX28Q9NUL7 540 aaKnown RBP10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ATPIF1Q9UII2 106 aa10.72□□□□□ -0.69
HLA-DQB1-203ENST00000399082 C5orf49A4QMS7 147 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 J3QRE1 110 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 GPRIN2O60269 458 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 MPZL2O60487 215 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ICMTO60725 284 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 CRYAAP02489 173 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ADRA2AP08913 450 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 DBTP11182 482 aaKnown RBP10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 EIF2B1Q14232 305 aaKnown RBP10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ITPR2Q14571 2701 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 SLC22A25Q6T423 547 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 RFPL4BQ6ZWI9 263 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 SSX6Q7RTT6 188 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 IL17RDQ8NFM7 739 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 OR4F15Q8NGB8 312 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 OR51G2Q8NGK0 314 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 OR2AJ1Q8NGZ0 328 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 RNF133Q8WVZ7 376 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 AKAP1Q92667 903 aaKnown RBP eCLIP10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 ATF6BQ99941 703 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 RHNO1Q9BSD3 238 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 CDADC1Q9BWV3 514 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 VCX3BQ9H321 246 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 LIME1Q9H400 295 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 C1orf198Q9H425 327 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 AMBNQ9NP70 447 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 H2AFY2Q9P0M6 372 aaPredicted RBP10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 PCDHGB5Q9Y5G0 923 aa10.71□□□□□ -0.69
HLA-DQB1-203ENST00000399082 AKAP6Q13023 2319 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CACNA1DQ01668 2161 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 C5orf63A6NC05 138 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CYSRT1A8MQ03 144 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 HS3ST1O14792 307 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SMPD2O60906 423 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 NGFP01138 241 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PTHP01270 115 aa10.7□□□□□ -0.7
HLA-DQB1-203ENST00000399082 LYNP07948 512 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms