RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 TAAR3PQ9P1P4 343 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 NDRG4Q9ULP0 352 aaKnown RBP12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 OR6C6A6NF89 314 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 TVP23AA6NH52 213 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 DEAF1O75398 565 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 COX5BP10606 129 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 DSCR9P59020 149 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 PPP1CBP62140 327 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 HIST1H3AP68431 136 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 NKPD1Q17RQ9 610 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 HIST2H3PS2Q5TEC6 136 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 HIST2H3AQ71DI3 136 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 GJC3Q8NFK1 279 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 OR1F12Q8NHA8 337 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 GTF3AQ92664 365 aaKnown RBP12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 MS4A5Q9H3V2 200 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 FBXO9Q9UK97 447 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 BAIAP2Q9UQB8 552 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 GRIP1Q9Y3R0 1128 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 A0A096LNT2 108 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 FAM183AA6NL82 134 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 LYNX1G3V0Z9 82 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ICMTO60725 284 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ABHD16AO95870 558 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 LYNX1P0DP58 116 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 PSKH1P11801 424 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ANXA8P13928 327 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 DAOP14920 347 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 GGT2P36268 569 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ARHGDIAP52565 204 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SELENOVP59797 346 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SLC18B1Q6NT16 456 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ACSM5Q6NUN0 579 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 TMEM154Q6P9G4 183 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SHQ1Q6PI26 577 aaKnown RBP12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CFAP77Q6ZQR2 320 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ATG16L2Q8NAA4 619 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 OR2T4Q8NH00 348 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 KLF14Q8TD94 323 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 IPCEF1Q8WWN9 437 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 NEU4Q8WWR8 484 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CDADC1Q9BWV3 514 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 HCAR1Q9BXC0 346 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 NMNAT2Q9BZQ4 307 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 POFUT1Q9H488 388 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 MED20Q9H944 212 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ZNF556Q9HAH1 456 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CMC2Q9NRP2 79 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CYB5R1Q9UHQ9 305 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 KLHL21Q9UJP4 597 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 AP4S1Q9Y587 144 aa12.06□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SVEP1Q4LDE5 3571 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 RIIAD1A6NNX1 92 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 IGHV3-13P01766 116 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 HPXP02790 462 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ERCC1P07992 297 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 OSMP13725 252 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SPI1P17947 270 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 GCH1P30793 250 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 PDLIM4P50479 330 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 DAPP51397 102 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 GINS1Q14691 196 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ATP6AP1Q15904 470 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 RSPO1Q2MKA7 263 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ZNF718Q3SXZ3 478 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ELFN2Q5R3F8 820 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 TMEM236Q5W0B7 351 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SLC27A4Q6P1M0 643 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 AMIGO2Q86SJ2 522 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ZNF511Q8NB15 262 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 LRTOMTQ8WZ04 291 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 WDR76Q9H967 626 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ELOVL3Q9HB03 270 aa12.05□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CR1P17927 2039 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 LOC390937A0A1W2PQ73 354 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CIB2O75838 187 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 NCR1O76036 304 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 IFNGP01579 166 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 HEXAP06865 529 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CSF3P09919 207 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ZNF823P16415 610 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ZNF3P17036 446 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 MAGEB1P43366 347 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 KRTAP1-1Q07627 177 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 MBNL2Q5VZF2 373 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ARL9Q6T311 187 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 UNQ6126/PRO20091Q6UXV3 157 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 OR6K6Q8NGW6 343 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 OR2AJ1Q8NGZ0 328 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 OR5K1Q8NHB7 308 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 PTP4A1Q93096 173 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 OTULINQ96BN8 352 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 NRBF2Q96F24 287 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 DUS3LQ96G46 650 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 MAP6Q96JE9 813 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 PITX2Q99697 317 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 HDHD2Q9H0R4 259 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 TBCCD1Q9NVR7 557 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SLCO1C1Q9NYB5 712 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 STARD10Q9Y365 291 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms