RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 CD38P28907 300 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 HSD17B7P56937 341 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 STEAP1BQ6NZ63 245 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 DCXRQ7Z4W1 244 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 OR4C16Q8NGL9 310 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 OR1L3Q8NH93 324 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 BTF3L4Q96K17 158 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 LPAR4Q99677 370 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 COPZ2Q9P299 210 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 RNF215Q9Y6U7 377 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 PRR32B1ATL7 298 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF878C9JN71 531 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 NPIPA2E9PIF3 369 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 HCKP08631 526 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 BTCP35070 178 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 MMP15P51511 669 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 ZP1P60852 638 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 FOXF1Q12946 379 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 TEX261Q6UWH6 196 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 GLDNQ6ZMI3 551 aaPredicted RBP4.46□□□□□ -1.7
SMAD4-202ENST00000398417 ATG4DQ86TL0 474 aaPredicted RBP4.46□□□□□ -1.7
SMAD4-202ENST00000398417 FJX1Q86VR8 437 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 SLC22A18ASQ8N1D0 253 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 BEST3Q8N1M1 668 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 SFXN2Q96NB2 322 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 VPS25Q9BRG1 176 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 TREM1Q9NP99 234 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 OR2S2Q9NQN1 319 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 OR52A1Q9UKL2 312 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 U3KQ87 197 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 TRBV11-1A0A0K0K1C0 115 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF726A6NNF4 738 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 CT45A8P0DMV1 189 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 CT45A9P0DMV2 189 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 MEOX1P50221 254 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 RPS15P62841 145 aaKnown RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 CXADRP78310 365 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 FMODQ06828 376 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 TNK1Q13470 666 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 CT45A2Q5DJT8 189 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM255AQ5JRV8 349 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 STPG1Q5TH74 334 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 EEF1A1P5Q5VTE0 462 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF680Q8NEM1 530 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 GHITMQ9H3K2 345 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 FRRS1LQ9P0K9 344 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 DOCK6Q96HP0 2047 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 CREBBPQ92793 2442 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 VSTM5A8MXK1 200 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 RGS11O94810 467 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 GLSO94925 669 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 CRABP1P29762 137 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 MFGE8Q08431 387 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 FAM209AQ5JX71 171 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 RHOUQ7L0Q8 258 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 GRAMD2AQ8IUY3 354 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 IFI44Q8TCB0 444 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 SARGQ9BW04 601 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 PLXNB1O43157 2135 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ARFGEF1Q9Y6D6 1849 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 A0A1W2PNR3 127 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 RPS10-NUDT3A0A1W2PQS6 291 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 A6NCN8 305 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 DCTN6O00399 190 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ARPC3O15145 178 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 LMX1BO60663 402 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ZFPL1O95159 310 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 NUDT3O95989 172 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 SLC6A1P30531 599 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 EMP2P54851 167 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 FAM74A1Q5RGS3 127 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 OR51E1Q8TCB6 317 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 OR8B4Q96RC9 309 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 KCNK17Q96T54 332 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 VSX1Q9NZR4 365 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 F5H0A9 414 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 DUX1O43812 170 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 SCGB1D2O95969 90 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 PLATP00750 562 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 IFNGR1P15260 489 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ADRA2CP18825 462 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 CAPZBP47756 277 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 PLAURQ03405 335 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 SFRP5Q5T4F7 317 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 AWAT2Q6E213 333 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 PWWP2BQ6NUJ5 590 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 UEVLDQ8IX04 471 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 PDZD9Q8IXQ8 264 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 SLC38A6Q8IZM9 456 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 TINAGL1Q9GZM7 467 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 LDAHQ9H6V9 325 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 PLEKHA1Q9HB21 404 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 PKDREJQ9NTG1 2253 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 HAO2Q9NYQ3 351 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ELF5Q9UKW6 265 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 TRAV8-7A0A075B6U6 113 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 HOXC4P09017 264 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 SULT1A3P0DMM9 295 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 SULT1A4P0DMN0 295 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 VSIG10L2P0DP72 767 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms